Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.11■□□□□ 0.81
GABRA3P34903 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
GABRA3P34903 OR7E47P-201ENST00000546390 1422 ntBASIC20.1■□□□□ 0.81
GABRA3P34903 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.1■□□□□ 0.81
GABRA3P34903 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
GABRA3P34903 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GABRA3P34903 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
GABRA3P34903 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GABRA3P34903 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GABRA3P34903 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
GABRA3P34903 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
GABRA3P34903 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.1■□□□□ 0.81
GABRA3P34903 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GABRA3P34903 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.1■□□□□ 0.81
GABRA3P34903 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
GABRA3P34903 AL355001.2-201ENST00000620617 1191 ntBASIC20.1■□□□□ 0.81
GABRA3P34903 C11orf96-202ENST00000528572 1834 ntBASIC20.1■□□□□ 0.81
GABRA3P34903 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.1■□□□□ 0.81
GABRA3P34903 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GABRA3P34903 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GABRA3P34903 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
GABRA3P34903 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GABRA3P34903 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.09■□□□□ 0.81
GABRA3P34903 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GABRA3P34903 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.09■□□□□ 0.81
GABRA3P34903 AC099791.1-201ENST00000416440 715 ntBASIC20.09■□□□□ 0.81
GABRA3P34903 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
GABRA3P34903 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GABRA3P34903 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
GABRA3P34903 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GABRA3P34903 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GABRA3P34903 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
GABRA3P34903 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
GABRA3P34903 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
GABRA3P34903 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
GABRA3P34903 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GABRA3P34903 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GABRA3P34903 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GABRA3P34903 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.08■□□□□ 0.81
GABRA3P34903 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.08■□□□□ 0.81
GABRA3P34903 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
GABRA3P34903 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
GABRA3P34903 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
GABRA3P34903 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
GABRA3P34903 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
GABRA3P34903 LINC00565-201ENST00000562710 2331 ntBASIC20.08■□□□□ 0.8
GABRA3P34903 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
GABRA3P34903 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
GABRA3P34903 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GABRA3P34903 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GABRA3P34903 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
GABRA3P34903 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
GABRA3P34903 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GABRA3P34903 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
GABRA3P34903 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.07■□□□□ 0.8
GABRA3P34903 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GABRA3P34903 AP001330.3-201ENST00000520123 633 ntBASIC20.07■□□□□ 0.8
GABRA3P34903 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GABRA3P34903 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.07■□□□□ 0.8
GABRA3P34903 AC027682.1-201ENST00000562846 899 ntBASIC20.07■□□□□ 0.8
GABRA3P34903 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.07■□□□□ 0.8
GABRA3P34903 PKD1P6-201ENST00000343738 4769 ntBASIC20.07■□□□□ 0.8
GABRA3P34903 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
GABRA3P34903 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.07■□□□□ 0.8
GABRA3P34903 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
GABRA3P34903 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.07■□□□□ 0.8
GABRA3P34903 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GABRA3P34903 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GABRA3P34903 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
GABRA3P34903 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.06■□□□□ 0.8
GABRA3P34903 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
GABRA3P34903 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GABRA3P34903 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GABRA3P34903 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GABRA3P34903 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GABRA3P34903 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GABRA3P34903 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.06■□□□□ 0.8
GABRA3P34903 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.06■□□□□ 0.8
GABRA3P34903 AF213884.3-201ENST00000563833 479 ntBASIC20.06■□□□□ 0.8
GABRA3P34903 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GABRA3P34903 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GABRA3P34903 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
GABRA3P34903 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GABRA3P34903 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
GABRA3P34903 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.06■□□□□ 0.8
GABRA3P34903 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GABRA3P34903 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GABRA3P34903 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GABRA3P34903 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.05■□□□□ 0.8
GABRA3P34903 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
GABRA3P34903 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.05■□□□□ 0.8
GABRA3P34903 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.05■□□□□ 0.8
GABRA3P34903 AC133561.4-201ENST00000566112 224 ntBASIC20.05■□□□□ 0.8
GABRA3P34903 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.05■□□□□ 0.8
GABRA3P34903 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GABRA3P34903 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.05■□□□□ 0.8
GABRA3P34903 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GABRA3P34903 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GABRA3P34903 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GABRA3P34903 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms