Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LCN1P31025 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
LCN1P31025 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.95■□□□□ 0.78
LCN1P31025 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LCN1P31025 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.95■□□□□ 0.78
LCN1P31025 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LCN1P31025 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LCN1P31025 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LCN1P31025 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LCN1P31025 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LCN1P31025 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LCN1P31025 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.95■□□□□ 0.78
LCN1P31025 AC099791.1-201ENST00000416440 715 ntBASIC19.95■□□□□ 0.78
LCN1P31025 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.95■□□□□ 0.78
LCN1P31025 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.95■□□□□ 0.78
LCN1P31025 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
LCN1P31025 AC008764.7-201ENST00000593779 1081 ntBASIC19.95■□□□□ 0.78
LCN1P31025 AL031432.3-201ENST00000607698 485 ntBASIC19.95■□□□□ 0.78
LCN1P31025 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.95■□□□□ 0.78
LCN1P31025 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
LCN1P31025 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LCN1P31025 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LCN1P31025 AC080038.3-201ENST00000623346 1952 ntBASIC19.95■□□□□ 0.78
LCN1P31025 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LCN1P31025 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
LCN1P31025 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
LCN1P31025 AC092053.2-201ENST00000640557 1818 ntBASIC19.95■□□□□ 0.78
LCN1P31025 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LCN1P31025 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LCN1P31025 AL024507.2-201ENST00000606070 2574 ntBASIC19.94■□□□□ 0.78
LCN1P31025 OR7E47P-201ENST00000546390 1422 ntBASIC19.94■□□□□ 0.78
LCN1P31025 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.94■□□□□ 0.78
LCN1P31025 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LCN1P31025 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
LCN1P31025 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.94■□□□□ 0.78
LCN1P31025 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
LCN1P31025 LINC00526-201ENST00000581067 1875 ntBASIC19.94■□□□□ 0.78
LCN1P31025 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LCN1P31025 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.93■□□□□ 0.78
LCN1P31025 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LCN1P31025 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LCN1P31025 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.93■□□□□ 0.78
LCN1P31025 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LCN1P31025 SUDS3P1-201ENST00000505831 966 ntBASIC19.93■□□□□ 0.78
LCN1P31025 AL136967.2-201ENST00000623968 743 ntBASIC19.93■□□□□ 0.78
LCN1P31025 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LCN1P31025 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
LCN1P31025 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.93■□□□□ 0.78
LCN1P31025 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.93■□□□□ 0.78
LCN1P31025 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LCN1P31025 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LCN1P31025 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
LCN1P31025 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LCN1P31025 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LCN1P31025 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LCN1P31025 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LCN1P31025 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
LCN1P31025 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
LCN1P31025 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LCN1P31025 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LCN1P31025 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LCN1P31025 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LCN1P31025 AF213884.3-201ENST00000563833 479 ntBASIC19.92■□□□□ 0.78
LCN1P31025 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.92■□□□□ 0.78
LCN1P31025 AL034346.1-201ENST00000568244 1277 ntBASIC19.92■□□□□ 0.78
LCN1P31025 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.92■□□□□ 0.78
LCN1P31025 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.92■□□□□ 0.78
LCN1P31025 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.92■□□□□ 0.78
LCN1P31025 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LCN1P31025 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LCN1P31025 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LCN1P31025 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LCN1P31025 LINC00565-201ENST00000562710 2331 ntBASIC19.91■□□□□ 0.78
LCN1P31025 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
LCN1P31025 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LCN1P31025 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
LCN1P31025 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.91■□□□□ 0.78
LCN1P31025 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.91■□□□□ 0.78
LCN1P31025 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LCN1P31025 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LCN1P31025 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LCN1P31025 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
LCN1P31025 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LCN1P31025 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LCN1P31025 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
LCN1P31025 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LCN1P31025 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LCN1P31025 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.9■□□□□ 0.78
LCN1P31025 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.9■□□□□ 0.78
LCN1P31025 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.9■□□□□ 0.78
LCN1P31025 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
LCN1P31025 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LCN1P31025 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
LCN1P31025 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LCN1P31025 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LCN1P31025 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LCN1P31025 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LCN1P31025 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.89■□□□□ 0.77
LCN1P31025 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LCN1P31025 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms