Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD40P25942 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.66■□□□□ 0.58
CD40P25942 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.66■□□□□ 0.58
CD40P25942 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.66■□□□□ 0.58
CD40P25942 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.66■□□□□ 0.58
CD40P25942 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD40P25942 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD40P25942 AC087742.1-201ENST00000575880 1738 ntBASIC18.66■□□□□ 0.58
CD40P25942 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD40P25942 AC004854.2-201ENST00000608450 1441 ntBASIC18.66■□□□□ 0.58
CD40P25942 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD40P25942 AP004607.4-201ENST00000530158 1459 ntBASIC18.65■□□□□ 0.58
CD40P25942 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD40P25942 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD40P25942 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD40P25942 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CD40P25942 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD40P25942 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CD40P25942 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CD40P25942 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.65■□□□□ 0.58
CD40P25942 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.65■□□□□ 0.58
CD40P25942 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.65■□□□□ 0.58
CD40P25942 KRT18P61-201ENST00000585825 1298 ntBASIC18.65■□□□□ 0.58
CD40P25942 AC092437.1-201ENST00000624794 1048 ntBASIC18.65■□□□□ 0.58
CD40P25942 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD40P25942 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD40P25942 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD40P25942 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.65■□□□□ 0.58
CD40P25942 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD40P25942 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD40P25942 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD40P25942 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD40P25942 LINC00526-201ENST00000581067 1875 ntBASIC18.65■□□□□ 0.58
CD40P25942 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CD40P25942 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.64■□□□□ 0.58
CD40P25942 AP004607.7-201ENST00000527152 1677 ntBASIC18.64■□□□□ 0.57
CD40P25942 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.64■□□□□ 0.57
CD40P25942 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.64■□□□□ 0.57
CD40P25942 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
CD40P25942 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.64■□□□□ 0.57
CD40P25942 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CD40P25942 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.64■□□□□ 0.57
CD40P25942 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CD40P25942 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD40P25942 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.63■□□□□ 0.57
CD40P25942 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.63■□□□□ 0.57
CD40P25942 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD40P25942 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.63■□□□□ 0.57
CD40P25942 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD40P25942 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD40P25942 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD40P25942 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD40P25942 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD40P25942 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.63■□□□□ 0.57
CD40P25942 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD40P25942 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD40P25942 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD40P25942 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CD40P25942 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.62■□□□□ 0.57
CD40P25942 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CD40P25942 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.62■□□□□ 0.57
CD40P25942 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.62■□□□□ 0.57
CD40P25942 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD40P25942 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD40P25942 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CD40P25942 AC137767.1-201ENST00000602918 1920 ntBASIC18.62■□□□□ 0.57
CD40P25942 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD40P25942 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.62■□□□□ 0.57
CD40P25942 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CD40P25942 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CD40P25942 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.61■□□□□ 0.57
CD40P25942 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.61■□□□□ 0.57
CD40P25942 KRT19P1-201ENST00000405746 1186 ntBASIC18.61■□□□□ 0.57
CD40P25942 AC004911.1-201ENST00000416316 871 ntBASIC18.61■□□□□ 0.57
CD40P25942 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.61■□□□□ 0.57
CD40P25942 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.61■□□□□ 0.57
CD40P25942 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.61■□□□□ 0.57
CD40P25942 AL034346.1-201ENST00000568244 1277 ntBASIC18.61■□□□□ 0.57
CD40P25942 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.61■□□□□ 0.57
CD40P25942 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.61■□□□□ 0.57
CD40P25942 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD40P25942 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CD40P25942 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD40P25942 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD40P25942 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD40P25942 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.6■□□□□ 0.57
CD40P25942 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.6■□□□□ 0.57
CD40P25942 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CD40P25942 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CD40P25942 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD40P25942 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.6■□□□□ 0.57
CD40P25942 AC137761.2-201ENST00000561729 223 ntBASIC18.6■□□□□ 0.57
CD40P25942 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.6■□□□□ 0.57
CD40P25942 AC145350.3-201ENST00000569033 163 ntBASIC18.6■□□□□ 0.57
CD40P25942 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CD40P25942 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CD40P25942 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD40P25942 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD40P25942 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD40P25942 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms