Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.06■□□□□ 0.32
PF4V1P10720 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.06■□□□□ 0.32
PF4V1P10720 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.06■□□□□ 0.32
PF4V1P10720 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PF4V1P10720 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PF4V1P10720 KRT18P5-201ENST00000436075 1291 ntBASIC17.06■□□□□ 0.32
PF4V1P10720 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PF4V1P10720 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PF4V1P10720 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PF4V1P10720 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
PF4V1P10720 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.06■□□□□ 0.32
PF4V1P10720 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.06■□□□□ 0.32
PF4V1P10720 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PF4V1P10720 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PF4V1P10720 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.06■□□□□ 0.32
PF4V1P10720 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PF4V1P10720 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PF4V1P10720 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PF4V1P10720 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PF4V1P10720 LINC02228-203ENST00000641970 1355 ntBASIC17.05■□□□□ 0.32
PF4V1P10720 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PF4V1P10720 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PF4V1P10720 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PF4V1P10720 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PF4V1P10720 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.05■□□□□ 0.32
PF4V1P10720 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.05■□□□□ 0.32
PF4V1P10720 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.05■□□□□ 0.32
PF4V1P10720 DUX4L2-201ENST00000561772 1275 ntBASIC17.05■□□□□ 0.32
PF4V1P10720 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.05■□□□□ 0.32
PF4V1P10720 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PF4V1P10720 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
PF4V1P10720 DUX4L6-201ENST00000626483 1275 ntBASIC17.05■□□□□ 0.32
PF4V1P10720 DUX4L1-201ENST00000627662 1275 ntBASIC17.05■□□□□ 0.32
PF4V1P10720 DUX4L8-201ENST00000629013 1275 ntBASIC17.05■□□□□ 0.32
PF4V1P10720 DUX4L3-201ENST00000630187 1275 ntBASIC17.05■□□□□ 0.32
PF4V1P10720 DUX4L7-201ENST00000630678 1275 ntBASIC17.05■□□□□ 0.32
PF4V1P10720 DUX4L5-201ENST00000630834 1275 ntBASIC17.05■□□□□ 0.32
PF4V1P10720 AC105233.4-201ENST00000642045 216 ntBASIC17.05■□□□□ 0.32
PF4V1P10720 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PF4V1P10720 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PF4V1P10720 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.05■□□□□ 0.32
PF4V1P10720 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
PF4V1P10720 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.05■□□□□ 0.32
PF4V1P10720 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PF4V1P10720 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PF4V1P10720 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PF4V1P10720 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PF4V1P10720 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
PF4V1P10720 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PF4V1P10720 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PF4V1P10720 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PF4V1P10720 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.04■□□□□ 0.32
PF4V1P10720 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
PF4V1P10720 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.04■□□□□ 0.32
PF4V1P10720 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PF4V1P10720 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PF4V1P10720 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PF4V1P10720 AC022517.1-201ENST00000592429 346 ntBASIC17.04■□□□□ 0.32
PF4V1P10720 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.04■□□□□ 0.32
PF4V1P10720 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PF4V1P10720 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PF4V1P10720 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.04■□□□□ 0.32
PF4V1P10720 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.04■□□□□ 0.32
PF4V1P10720 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PF4V1P10720 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PF4V1P10720 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PF4V1P10720 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PF4V1P10720 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PF4V1P10720 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
PF4V1P10720 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PF4V1P10720 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.03■□□□□ 0.32
PF4V1P10720 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PF4V1P10720 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PF4V1P10720 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.03■□□□□ 0.32
PF4V1P10720 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PF4V1P10720 CCDC92B-201ENST00000575506 885 ntBASIC17.03■□□□□ 0.32
PF4V1P10720 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PF4V1P10720 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PF4V1P10720 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PF4V1P10720 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PF4V1P10720 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PF4V1P10720 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.03■□□□□ 0.32
PF4V1P10720 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PF4V1P10720 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.02■□□□□ 0.32
PF4V1P10720 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PF4V1P10720 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PF4V1P10720 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PF4V1P10720 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PF4V1P10720 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PF4V1P10720 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.02■□□□□ 0.32
PF4V1P10720 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
PF4V1P10720 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PF4V1P10720 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PF4V1P10720 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.32
PF4V1P10720 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.02■□□□□ 0.32
PF4V1P10720 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.02■□□□□ 0.32
PF4V1P10720 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PF4V1P10720 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PF4V1P10720 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PF4V1P10720 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms