Protein–RNA interactions for Protein: P0DJI8

SAA1, Serum amyloid A-1 protein, humanhuman

Predicted RBP Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA1P0DJI8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.38
SAA1P0DJI8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
SAA1P0DJI8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
SAA1P0DJI8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SAA1P0DJI8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SAA1P0DJI8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.39■□□□□ 0.37
SAA1P0DJI8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.39■□□□□ 0.37
SAA1P0DJI8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SAA1P0DJI8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
SAA1P0DJI8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SAA1P0DJI8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.39■□□□□ 0.37
SAA1P0DJI8 AC079089.2-201ENST00000531211 1277 ntBASIC17.39■□□□□ 0.37
SAA1P0DJI8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.39■□□□□ 0.37
SAA1P0DJI8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
SAA1P0DJI8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SAA1P0DJI8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SAA1P0DJI8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SAA1P0DJI8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SAA1P0DJI8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SAA1P0DJI8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SAA1P0DJI8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SAA1P0DJI8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SAA1P0DJI8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SAA1P0DJI8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.39■□□□□ 0.37
SAA1P0DJI8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SAA1P0DJI8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SAA1P0DJI8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SAA1P0DJI8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.38■□□□□ 0.37
SAA1P0DJI8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SAA1P0DJI8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SAA1P0DJI8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SAA1P0DJI8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SAA1P0DJI8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.38■□□□□ 0.37
SAA1P0DJI8 SYT6-210ENST00000641643 1587 ntBASIC17.38■□□□□ 0.37
SAA1P0DJI8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SAA1P0DJI8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SAA1P0DJI8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.38■□□□□ 0.37
SAA1P0DJI8 AC131281.2-201ENST00000520478 145 ntBASIC17.38■□□□□ 0.37
SAA1P0DJI8 AC068587.7-201ENST00000641602 218 ntBASIC17.38■□□□□ 0.37
SAA1P0DJI8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SAA1P0DJI8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.38■□□□□ 0.37
SAA1P0DJI8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SAA1P0DJI8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SAA1P0DJI8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.38■□□□□ 0.37
SAA1P0DJI8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SAA1P0DJI8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SAA1P0DJI8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.37■□□□□ 0.37
SAA1P0DJI8 SERBP1P1-201ENST00000396021 1160 ntBASIC17.37■□□□□ 0.37
SAA1P0DJI8 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.37■□□□□ 0.37
SAA1P0DJI8 DUX4L19-201ENST00000557448 1267 ntBASIC17.37■□□□□ 0.37
SAA1P0DJI8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SAA1P0DJI8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.37■□□□□ 0.37
SAA1P0DJI8 AC087239.1-201ENST00000622671 572 ntBASIC17.37■□□□□ 0.37
SAA1P0DJI8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SAA1P0DJI8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SAA1P0DJI8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SAA1P0DJI8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.37■□□□□ 0.37
SAA1P0DJI8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SAA1P0DJI8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SAA1P0DJI8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SAA1P0DJI8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.36■□□□□ 0.37
SAA1P0DJI8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SAA1P0DJI8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SAA1P0DJI8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SAA1P0DJI8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
SAA1P0DJI8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SAA1P0DJI8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.36■□□□□ 0.37
SAA1P0DJI8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SAA1P0DJI8 AC010525.1-201ENST00000585559 441 ntBASIC17.36■□□□□ 0.37
SAA1P0DJI8 AL138724.1-201ENST00000606771 1088 ntBASIC17.36■□□□□ 0.37
SAA1P0DJI8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.36■□□□□ 0.37
SAA1P0DJI8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.36■□□□□ 0.37
SAA1P0DJI8 OR7E47P-201ENST00000546390 1422 ntBASIC17.36■□□□□ 0.37
SAA1P0DJI8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.36■□□□□ 0.37
SAA1P0DJI8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SAA1P0DJI8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SAA1P0DJI8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
SAA1P0DJI8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SAA1P0DJI8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.35■□□□□ 0.37
SAA1P0DJI8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SAA1P0DJI8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SAA1P0DJI8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.35■□□□□ 0.37
SAA1P0DJI8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SAA1P0DJI8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SAA1P0DJI8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.35■□□□□ 0.37
SAA1P0DJI8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
SAA1P0DJI8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SAA1P0DJI8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SAA1P0DJI8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SAA1P0DJI8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.35■□□□□ 0.37
SAA1P0DJI8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SAA1P0DJI8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SAA1P0DJI8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SAA1P0DJI8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SAA1P0DJI8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
SAA1P0DJI8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
SAA1P0DJI8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.34■□□□□ 0.37
SAA1P0DJI8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SAA1P0DJI8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.34■□□□□ 0.37
SAA1P0DJI8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms