Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 YBR116CYBR116C 528 nt4.06□□□□□ -1.76
TY2A-LR1P0C2J4 ERV15YBR210W 429 nt4.06□□□□□ -1.76
TY2A-LR1P0C2J4 POF1YCL047C 777 nt4.06□□□□□ -1.76
TY2A-LR1P0C2J4 SEC59YMR013C 1560 nt4.06□□□□□ -1.76
TY2A-LR1P0C2J4 ATP16YDL004W 483 nt4.05□□□□□ -1.76
TY2A-LR1P0C2J4 FCF1YDR339C 570 nt4.05□□□□□ -1.76
TY2A-LR1P0C2J4 YDR535CYDR535C 501 nt4.05□□□□□ -1.76
TY2A-LR1P0C2J4 BNA6YFR047C 888 nt4.05□□□□□ -1.76
TY2A-LR1P0C2J4 YGL132WYGL132W 336 nt4.05□□□□□ -1.76
TY2A-LR1P0C2J4 SPO11YHL022C 1197 nt4.05□□□□□ -1.76
TY2A-LR1P0C2J4 YHI9YHR029C 885 nt4.05□□□□□ -1.76
TY2A-LR1P0C2J4 YIL171WYIL171W 330 nt4.05□□□□□ -1.76
TY2A-LR1P0C2J4 YAL034C-BYAL034C-B 354 nt4.05□□□□□ -1.76
TY2A-LR1P0C2J4 YLR347W-AYLR347W-A 141 nt4.05□□□□□ -1.76
TY2A-LR1P0C2J4 YNL057WYNL057W 333 nt4.05□□□□□ -1.76
TY2A-LR1P0C2J4 TRM112YNR046W 408 nt4.05□□□□□ -1.76
TY2A-LR1P0C2J4 snR189snR189 189 nt4.05□□□□□ -1.76
TY2A-LR1P0C2J4 YPR174CYPR174C 666 nt4.05□□□□□ -1.76
TY2A-LR1P0C2J4 YBR242WYBR242W 717 nt4.05□□□□□ -1.76
TY2A-LR1P0C2J4 YPL260WYPL260W 1656 nt4.05□□□□□ -1.76
TY2A-LR1P0C2J4 RDH54YBR073W 2877 nt4.05□□□□□ -1.76
TY2A-LR1P0C2J4 YCR023CYCR023C 1836 nt4.05□□□□□ -1.76
TY2A-LR1P0C2J4 YBR238CYBR238C 2196 nt4.04□□□□□ -1.76
TY2A-LR1P0C2J4 VBA2YBR293W 1425 nt4.04□□□□□ -1.76
TY2A-LR1P0C2J4 MGA1YGR249W 1371 nt4.04□□□□□ -1.76
TY2A-LR1P0C2J4 SPT14YPL175W 1359 nt4.04□□□□□ -1.76
TY2A-LR1P0C2J4 GDH2YDL215C 3279 nt4.04□□□□□ -1.76
TY2A-LR1P0C2J4 OCA4YCR095C 1089 nt4.04□□□□□ -1.76
TY2A-LR1P0C2J4 LSM4YER112W 564 nt4.04□□□□□ -1.76
TY2A-LR1P0C2J4 RAD27YKL113C 1149 nt4.04□□□□□ -1.76
TY2A-LR1P0C2J4 SMD2YLR275W 333 nt4.04□□□□□ -1.76
TY2A-LR1P0C2J4 URA5YML106W 681 nt4.04□□□□□ -1.76
TY2A-LR1P0C2J4 CSM3YMR048W 954 nt4.04□□□□□ -1.76
TY2A-LR1P0C2J4 YBL068W-AYBL068W-A 237 nt4.04□□□□□ -1.76
TY2A-LR1P0C2J4 GRX5YPL059W 453 nt4.04□□□□□ -1.76
TY2A-LR1P0C2J4 DIM1YPL266W 957 nt4.04□□□□□ -1.76
TY2A-LR1P0C2J4 AZR1YGR224W 1842 nt4.04□□□□□ -1.76
TY2A-LR1P0C2J4 NTH1YDR001C 2256 nt4.04□□□□□ -1.76
TY2A-LR1P0C2J4 KRE28YDR532C 1158 nt4.03□□□□□ -1.76
TY2A-LR1P0C2J4 RSM25YIL093C 795 nt4.03□□□□□ -1.76
TY2A-LR1P0C2J4 YMR310CYMR310C 954 nt4.03□□□□□ -1.76
TY2A-LR1P0C2J4 TAZ1YPR140W 1146 nt4.03□□□□□ -1.76
TY2A-LR1P0C2J4 RAD54YGL163C 2697 nt4.03□□□□□ -1.76
TY2A-LR1P0C2J4 TRF5YNL299W 1929 nt4.03□□□□□ -1.76
TY2A-LR1P0C2J4 TRM11YOL124C 1302 nt4.02□□□□□ -1.77
TY2A-LR1P0C2J4 LAS1YKR063C 1509 nt4.02□□□□□ -1.77
TY2A-LR1P0C2J4 DSE1YER124C 1722 nt4.02□□□□□ -1.77
TY2A-LR1P0C2J4 RPS25AYGR027C 327 nt4.02□□□□□ -1.77
TY2A-LR1P0C2J4 PET130YJL023C 1044 nt4.02□□□□□ -1.77
TY2A-LR1P0C2J4 MOH1YBL049W 417 nt4.02□□□□□ -1.77
TY2A-LR1P0C2J4 END3YNL084C 1050 nt4.02□□□□□ -1.77
TY2A-LR1P0C2J4 MRPL17YNL252C 846 nt4.02□□□□□ -1.77
TY2A-LR1P0C2J4 FIG1YBR040W 897 nt4.02□□□□□ -1.77
TY2A-LR1P0C2J4 IDI1YPL117C 867 nt4.02□□□□□ -1.77
TY2A-LR1P0C2J4 POP4YBR257W 840 nt4.02□□□□□ -1.77
TY2A-LR1P0C2J4 FLO8YER109C 2400 nt4.02□□□□□ -1.77
TY2A-LR1P0C2J4 YPL109CYPL109C 1974 nt4.02□□□□□ -1.77
TY2A-LR1P0C2J4 OLE1YGL055W 1533 nt4.01□□□□□ -1.77
TY2A-LR1P0C2J4 SPI1YER150W 447 nt4.01□□□□□ -1.77
TY2A-LR1P0C2J4 YFL012WYFL012W 447 nt4.01□□□□□ -1.77
TY2A-LR1P0C2J4 RPL24AYGL031C 468 nt4.01□□□□□ -1.77
TY2A-LR1P0C2J4 COX6YHR051W 447 nt4.01□□□□□ -1.77
TY2A-LR1P0C2J4 YAR075WYAR075W 474 nt4.01□□□□□ -1.77
TY2A-LR1P0C2J4 SWC7YLR385C 399 nt4.01□□□□□ -1.77
TY2A-LR1P0C2J4 YML031C-AYML031C-A 336 nt4.01□□□□□ -1.77
TY2A-LR1P0C2J4 TOM7YNL070W 183 nt4.01□□□□□ -1.77
TY2A-LR1P0C2J4 IST1YNL265C 897 nt4.01□□□□□ -1.77
TY2A-LR1P0C2J4 YNL320WYNL320W 855 nt4.01□□□□□ -1.77
TY2A-LR1P0C2J4 HUA2YOR284W 732 nt4.01□□□□□ -1.77
TY2A-LR1P0C2J4 YPL025CYPL025C 558 nt4.01□□□□□ -1.77
TY2A-LR1P0C2J4 SAG1YJR004C 1953 nt4.01□□□□□ -1.77
TY2A-LR1P0C2J4 FAA1YOR317W 2103 nt4.01□□□□□ -1.77
TY2A-LR1P0C2J4 RNA14YMR061W 2034 nt4□□□□□ -1.77
TY2A-LR1P0C2J4 ISW2YOR304W 3363 nt4□□□□□ -1.77
TY2A-LR1P0C2J4 LYS2YBR115C 4179 nt4□□□□□ -1.77
TY2A-LR1P0C2J4 RPP1AYDL081C 321 nt4□□□□□ -1.77
TY2A-LR1P0C2J4 API2YDR525W 330 nt4□□□□□ -1.77
TY2A-LR1P0C2J4 EFB1YAL003W 621 nt4□□□□□ -1.77
TY2A-LR1P0C2J4 RDN5-1RDN5-1 121 nt4□□□□□ -1.77
TY2A-LR1P0C2J4 RDN5-6RDN5-6 121 nt4□□□□□ -1.77
TY2A-LR1P0C2J4 YLR428CYLR428C 345 nt4□□□□□ -1.77
TY2A-LR1P0C2J4 RPL15BYMR121C 615 nt4□□□□□ -1.77
TY2A-LR1P0C2J4 DLT1YMR126C 1029 nt4□□□□□ -1.77
TY2A-LR1P0C2J4 YNL303WYNL303W 348 nt4□□□□□ -1.77
TY2A-LR1P0C2J4 YPR078CYPR078C 1119 nt4□□□□□ -1.77
TY2A-LR1P0C2J4 YML020WYML020W 1995 nt4□□□□□ -1.77
TY2A-LR1P0C2J4 UBP12YJL197W 3765 nt4□□□□□ -1.77
TY2A-LR1P0C2J4 EPO1YMR124W 2832 nt3.99□□□□□ -1.77
TY2A-LR1P0C2J4 PRP28YDR243C 1767 nt3.99□□□□□ -1.77
TY2A-LR1P0C2J4 ACK1YDL203C 1872 nt3.99□□□□□ -1.77
TY2A-LR1P0C2J4 GRC3YLL035W 1899 nt3.99□□□□□ -1.77
TY2A-LR1P0C2J4 RPG1YBR079C 2895 nt3.99□□□□□ -1.77
TY2A-LR1P0C2J4 THI13YDL244W 1023 nt3.99□□□□□ -1.77
TY2A-LR1P0C2J4 THI11YJR156C 1023 nt3.99□□□□□ -1.77
TY2A-LR1P0C2J4 SSO2YMR183C 888 nt3.99□□□□□ -1.77
TY2A-LR1P0C2J4 snR11snR11 258 nt3.99□□□□□ -1.77
TY2A-LR1P0C2J4 RSC3YDR303C 2658 nt3.99□□□□□ -1.77
TY2A-LR1P0C2J4 SPC105YGL093W 2754 nt3.99□□□□□ -1.77
TY2A-LR1P0C2J4 FDC1YDR539W 1512 nt3.99□□□□□ -1.77
TY2A-LR1P0C2J4 FRT2YAL028W 1587 nt3.98□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 42 ms