Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRAP04437 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TCRAP04437 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TCRAP04437 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRAP04437 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TCRAP04437 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.42■□□□□ 0.22
TCRAP04437 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TCRAP04437 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRAP04437 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.42■□□□□ 0.22
TCRAP04437 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRAP04437 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TCRAP04437 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TCRAP04437 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRAP04437 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.41■□□□□ 0.22
TCRAP04437 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
TCRAP04437 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TCRAP04437 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRAP04437 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRAP04437 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRAP04437 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRAP04437 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRAP04437 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TCRAP04437 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRAP04437 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRAP04437 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRAP04437 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TCRAP04437 AC004987.1-201ENST00000428627 508 ntBASIC16.41■□□□□ 0.22
TCRAP04437 MIR4508-201ENST00000584178 70 ntBASIC16.41■□□□□ 0.22
TCRAP04437 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TCRAP04437 AF106564.1-201ENST00000607058 2553 ntBASIC16.41■□□□□ 0.22
TCRAP04437 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TCRAP04437 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
TCRAP04437 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.41■□□□□ 0.22
TCRAP04437 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.4■□□□□ 0.22
TCRAP04437 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
TCRAP04437 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRAP04437 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TCRAP04437 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.4■□□□□ 0.22
TCRAP04437 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.4■□□□□ 0.22
TCRAP04437 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRAP04437 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TCRAP04437 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRAP04437 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRAP04437 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRAP04437 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.4■□□□□ 0.22
TCRAP04437 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.4■□□□□ 0.22
TCRAP04437 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRAP04437 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TCRAP04437 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRAP04437 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TCRAP04437 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRAP04437 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRAP04437 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRAP04437 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TCRAP04437 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRAP04437 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TCRAP04437 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRAP04437 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TCRAP04437 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRAP04437 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TCRAP04437 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
TCRAP04437 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
TCRAP04437 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRAP04437 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TCRAP04437 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRAP04437 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.39■□□□□ 0.21
TCRAP04437 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TCRAP04437 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.39■□□□□ 0.21
TCRAP04437 AC137630.3-201ENST00000607245 391 ntBASIC16.39■□□□□ 0.21
TCRAP04437 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TCRAP04437 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TCRAP04437 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.39■□□□□ 0.21
TCRAP04437 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRAP04437 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRAP04437 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRAP04437 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.39■□□□□ 0.21
TCRAP04437 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRAP04437 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.38■□□□□ 0.21
TCRAP04437 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TCRAP04437 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TCRAP04437 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TCRAP04437 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TCRAP04437 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TCRAP04437 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TCRAP04437 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TCRAP04437 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.38■□□□□ 0.21
TCRAP04437 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.38■□□□□ 0.21
TCRAP04437 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TCRAP04437 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TCRAP04437 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TCRAP04437 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TCRAP04437 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TCRAP04437 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.38■□□□□ 0.21
TCRAP04437 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.37■□□□□ 0.21
TCRAP04437 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.37■□□□□ 0.21
TCRAP04437 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TCRAP04437 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
TCRAP04437 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCRAP04437 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCRAP04437 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms