Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
OPN1SWP03999 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
OPN1SWP03999 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
OPN1SWP03999 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.16■□□□□ 0.82
OPN1SWP03999 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.16■□□□□ 0.82
OPN1SWP03999 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
OPN1SWP03999 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
OPN1SWP03999 AL024507.2-201ENST00000606070 2574 ntBASIC20.15■□□□□ 0.82
OPN1SWP03999 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
OPN1SWP03999 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
OPN1SWP03999 AC006455.2-201ENST00000429931 906 ntBASIC20.15■□□□□ 0.82
OPN1SWP03999 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.15■□□□□ 0.82
OPN1SWP03999 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
OPN1SWP03999 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
OPN1SWP03999 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
OPN1SWP03999 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.15■□□□□ 0.82
OPN1SWP03999 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
OPN1SWP03999 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.15■□□□□ 0.82
OPN1SWP03999 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
OPN1SWP03999 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
OPN1SWP03999 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
OPN1SWP03999 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
OPN1SWP03999 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
OPN1SWP03999 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
OPN1SWP03999 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
OPN1SWP03999 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
OPN1SWP03999 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
OPN1SWP03999 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
OPN1SWP03999 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.14■□□□□ 0.81
OPN1SWP03999 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
OPN1SWP03999 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
OPN1SWP03999 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
OPN1SWP03999 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.14■□□□□ 0.81
OPN1SWP03999 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.14■□□□□ 0.81
OPN1SWP03999 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
OPN1SWP03999 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.14■□□□□ 0.81
OPN1SWP03999 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
OPN1SWP03999 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.14■□□□□ 0.81
OPN1SWP03999 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
OPN1SWP03999 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.14■□□□□ 0.81
OPN1SWP03999 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
OPN1SWP03999 AC244015.2-201ENST00000616358 1861 ntBASIC20.13■□□□□ 0.81
OPN1SWP03999 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
OPN1SWP03999 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
OPN1SWP03999 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
OPN1SWP03999 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
OPN1SWP03999 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
OPN1SWP03999 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.13■□□□□ 0.81
OPN1SWP03999 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
OPN1SWP03999 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.13■□□□□ 0.81
OPN1SWP03999 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
OPN1SWP03999 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
OPN1SWP03999 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
OPN1SWP03999 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
OPN1SWP03999 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.13■□□□□ 0.81
OPN1SWP03999 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
OPN1SWP03999 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
OPN1SWP03999 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
OPN1SWP03999 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.12■□□□□ 0.81
OPN1SWP03999 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
OPN1SWP03999 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
OPN1SWP03999 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
OPN1SWP03999 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
OPN1SWP03999 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
OPN1SWP03999 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
OPN1SWP03999 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
OPN1SWP03999 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
OPN1SWP03999 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
OPN1SWP03999 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
OPN1SWP03999 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
OPN1SWP03999 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.12■□□□□ 0.81
OPN1SWP03999 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.12■□□□□ 0.81
OPN1SWP03999 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
OPN1SWP03999 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
OPN1SWP03999 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
OPN1SWP03999 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.11■□□□□ 0.81
OPN1SWP03999 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.11■□□□□ 0.81
OPN1SWP03999 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
OPN1SWP03999 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
OPN1SWP03999 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
OPN1SWP03999 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
OPN1SWP03999 KRT16P3-201ENST00000439127 1283 ntBASIC20.11■□□□□ 0.81
OPN1SWP03999 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.11■□□□□ 0.81
OPN1SWP03999 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.11■□□□□ 0.81
OPN1SWP03999 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
OPN1SWP03999 pRNA.6-201ENST00000610482 90 ntBASIC20.11■□□□□ 0.81
OPN1SWP03999 pRNA.5-201ENST00000612139 90 ntBASIC20.11■□□□□ 0.81
OPN1SWP03999 pRNA.11-201ENST00000618423 90 ntBASIC20.11■□□□□ 0.81
OPN1SWP03999 pRNA.13-201ENST00000619112 90 ntBASIC20.11■□□□□ 0.81
OPN1SWP03999 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
OPN1SWP03999 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
OPN1SWP03999 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
OPN1SWP03999 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.11■□□□□ 0.81
OPN1SWP03999 AC133637.1-201ENST00000624115 1537 ntBASIC20.11■□□□□ 0.81
OPN1SWP03999 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
OPN1SWP03999 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
OPN1SWP03999 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
OPN1SWP03999 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
OPN1SWP03999 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.1■□□□□ 0.81
OPN1SWP03999 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms