Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.01■□□□□ 0.63
APOC1P02654 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
APOC1P02654 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
APOC1P02654 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
APOC1P02654 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
APOC1P02654 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
APOC1P02654 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
APOC1P02654 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19■□□□□ 0.63
APOC1P02654 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
APOC1P02654 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19■□□□□ 0.63
APOC1P02654 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19■□□□□ 0.63
APOC1P02654 LINC00565-201ENST00000562710 2331 ntBASIC19■□□□□ 0.63
APOC1P02654 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19■□□□□ 0.63
APOC1P02654 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19■□□□□ 0.63
APOC1P02654 AL356441.2-201ENST00000443009 864 ntBASIC19■□□□□ 0.63
APOC1P02654 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19■□□□□ 0.63
APOC1P02654 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19■□□□□ 0.63
APOC1P02654 SRR-208ENST00000576848 588 ntTSL 4 BASIC19■□□□□ 0.63
APOC1P02654 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
APOC1P02654 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19■□□□□ 0.63
APOC1P02654 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19■□□□□ 0.63
APOC1P02654 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
APOC1P02654 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
APOC1P02654 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19■□□□□ 0.63
APOC1P02654 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19■□□□□ 0.63
APOC1P02654 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19■□□□□ 0.63
APOC1P02654 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOC1P02654 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
APOC1P02654 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOC1P02654 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOC1P02654 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOC1P02654 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.99■□□□□ 0.63
APOC1P02654 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
APOC1P02654 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
APOC1P02654 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.99■□□□□ 0.63
APOC1P02654 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.99■□□□□ 0.63
APOC1P02654 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.99■□□□□ 0.63
APOC1P02654 AC087239.1-201ENST00000622671 572 ntBASIC18.99■□□□□ 0.63
APOC1P02654 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.99■□□□□ 0.63
APOC1P02654 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOC1P02654 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOC1P02654 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOC1P02654 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
APOC1P02654 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.98■□□□□ 0.63
APOC1P02654 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
APOC1P02654 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOC1P02654 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
APOC1P02654 AC006455.2-201ENST00000429931 906 ntBASIC18.98■□□□□ 0.63
APOC1P02654 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.98■□□□□ 0.63
APOC1P02654 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
APOC1P02654 AL031602.1-201ENST00000633169 911 ntBASIC18.98■□□□□ 0.63
APOC1P02654 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.98■□□□□ 0.63
APOC1P02654 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOC1P02654 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOC1P02654 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
APOC1P02654 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
APOC1P02654 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.98■□□□□ 0.63
APOC1P02654 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APOC1P02654 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
APOC1P02654 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APOC1P02654 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
APOC1P02654 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.97■□□□□ 0.63
APOC1P02654 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
APOC1P02654 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.97■□□□□ 0.63
APOC1P02654 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
APOC1P02654 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.97■□□□□ 0.63
APOC1P02654 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.97■□□□□ 0.63
APOC1P02654 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.97■□□□□ 0.63
APOC1P02654 MIR3181-201ENST00000578512 73 ntBASIC18.97■□□□□ 0.63
APOC1P02654 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.97■□□□□ 0.63
APOC1P02654 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.97■□□□□ 0.63
APOC1P02654 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.97■□□□□ 0.63
APOC1P02654 AL138724.1-201ENST00000606771 1088 ntBASIC18.97■□□□□ 0.63
APOC1P02654 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APOC1P02654 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
APOC1P02654 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APOC1P02654 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APOC1P02654 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APOC1P02654 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.97■□□□□ 0.63
APOC1P02654 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APOC1P02654 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
APOC1P02654 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
APOC1P02654 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.96■□□□□ 0.63
APOC1P02654 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.96■□□□□ 0.63
APOC1P02654 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.96■□□□□ 0.63
APOC1P02654 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.96■□□□□ 0.63
APOC1P02654 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.96■□□□□ 0.63
APOC1P02654 OR2I1P-207ENST00000453522 948 ntBASIC18.96■□□□□ 0.63
APOC1P02654 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.96■□□□□ 0.63
APOC1P02654 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.96■□□□□ 0.63
APOC1P02654 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.96■□□□□ 0.63
APOC1P02654 AL512631.2-201ENST00000604634 923 ntBASIC18.96■□□□□ 0.63
APOC1P02654 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
APOC1P02654 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
APOC1P02654 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
APOC1P02654 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.96■□□□□ 0.63
APOC1P02654 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
APOC1P02654 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.96■□□□□ 0.63
APOC1P02654 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
APOC1P02654 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms