Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.22■□□□□ 0.99
CPNE6O95741 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE6O95741 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE6O95741 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE6O95741 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE6O95741 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE6O95741 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE6O95741 AC004687.1-201ENST00000579003 1625 ntBASIC21.22■□□□□ 0.99
CPNE6O95741 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE6O95741 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE6O95741 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CPNE6O95741 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.21■□□□□ 0.99
CPNE6O95741 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE6O95741 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE6O95741 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.21■□□□□ 0.99
CPNE6O95741 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.21■□□□□ 0.99
CPNE6O95741 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
CPNE6O95741 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE6O95741 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE6O95741 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.21■□□□□ 0.99
CPNE6O95741 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.21■□□□□ 0.99
CPNE6O95741 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CPNE6O95741 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE6O95741 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.2■□□□□ 0.98
CPNE6O95741 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE6O95741 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE6O95741 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CPNE6O95741 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE6O95741 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE6O95741 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.2■□□□□ 0.98
CPNE6O95741 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE6O95741 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE6O95741 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.2■□□□□ 0.98
CPNE6O95741 AC090192.1-201ENST00000517740 490 ntBASIC21.2■□□□□ 0.98
CPNE6O95741 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE6O95741 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.2■□□□□ 0.98
CPNE6O95741 AC092437.1-201ENST00000624794 1048 ntBASIC21.2■□□□□ 0.98
CPNE6O95741 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE6O95741 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CPNE6O95741 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE6O95741 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
CPNE6O95741 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE6O95741 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CPNE6O95741 AL353803.4-201ENST00000565882 1934 ntBASIC21.19■□□□□ 0.98
CPNE6O95741 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.19■□□□□ 0.98
CPNE6O95741 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CPNE6O95741 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE6O95741 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.19■□□□□ 0.98
CPNE6O95741 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
CPNE6O95741 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.19■□□□□ 0.98
CPNE6O95741 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CPNE6O95741 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE6O95741 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE6O95741 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.19■□□□□ 0.98
CPNE6O95741 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.19■□□□□ 0.98
CPNE6O95741 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE6O95741 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE6O95741 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE6O95741 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.18■□□□□ 0.98
CPNE6O95741 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.18■□□□□ 0.98
CPNE6O95741 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.18■□□□□ 0.98
CPNE6O95741 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CPNE6O95741 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CPNE6O95741 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.18■□□□□ 0.98
CPNE6O95741 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE6O95741 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CPNE6O95741 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CPNE6O95741 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE6O95741 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE6O95741 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE6O95741 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE6O95741 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.17■□□□□ 0.98
CPNE6O95741 AC087239.1-201ENST00000622671 572 ntBASIC21.17■□□□□ 0.98
CPNE6O95741 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE6O95741 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE6O95741 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE6O95741 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE6O95741 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.16■□□□□ 0.98
CPNE6O95741 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
CPNE6O95741 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CPNE6O95741 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE6O95741 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CPNE6O95741 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CPNE6O95741 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.16■□□□□ 0.98
CPNE6O95741 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
CPNE6O95741 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.15■□□□□ 0.98
CPNE6O95741 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.15■□□□□ 0.98
CPNE6O95741 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE6O95741 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE6O95741 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE6O95741 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CPNE6O95741 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.15■□□□□ 0.98
CPNE6O95741 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.15■□□□□ 0.98
CPNE6O95741 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE6O95741 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.15■□□□□ 0.98
CPNE6O95741 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE6O95741 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.14■□□□□ 0.98
CPNE6O95741 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CPNE6O95741 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
CPNE6O95741 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms