Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TRIM3O75382 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM3O75382 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
TRIM3O75382 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM3O75382 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM3O75382 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
TRIM3O75382 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM3O75382 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM3O75382 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM3O75382 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM3O75382 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TRIM3O75382 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TRIM3O75382 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM3O75382 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM3O75382 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.06■□□□□ 0.8
TRIM3O75382 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM3O75382 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TRIM3O75382 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.06■□□□□ 0.8
TRIM3O75382 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM3O75382 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM3O75382 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM3O75382 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM3O75382 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM3O75382 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM3O75382 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM3O75382 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM3O75382 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TRIM3O75382 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM3O75382 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
TRIM3O75382 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
TRIM3O75382 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM3O75382 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM3O75382 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM3O75382 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM3O75382 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM3O75382 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TRIM3O75382 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM3O75382 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TRIM3O75382 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TRIM3O75382 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM3O75382 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TRIM3O75382 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM3O75382 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM3O75382 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM3O75382 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM3O75382 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TRIM3O75382 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
TRIM3O75382 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM3O75382 AL031602.1-201ENST00000633169 911 ntBASIC20.03■□□□□ 0.8
TRIM3O75382 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM3O75382 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM3O75382 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM3O75382 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM3O75382 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM3O75382 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
TRIM3O75382 AL121603.2-201ENST00000557373 2117 ntBASIC20.02■□□□□ 0.8
TRIM3O75382 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TRIM3O75382 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM3O75382 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.02■□□□□ 0.8
TRIM3O75382 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM3O75382 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM3O75382 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
TRIM3O75382 AC068587.7-201ENST00000641602 218 ntBASIC20.02■□□□□ 0.8
TRIM3O75382 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
TRIM3O75382 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM3O75382 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM3O75382 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM3O75382 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.02■□□□□ 0.79
TRIM3O75382 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM3O75382 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.02■□□□□ 0.79
TRIM3O75382 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM3O75382 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM3O75382 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TRIM3O75382 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TRIM3O75382 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TRIM3O75382 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM3O75382 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM3O75382 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM3O75382 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM3O75382 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM3O75382 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM3O75382 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM3O75382 MIR572-201ENST00000384983 95 ntBASIC20.01■□□□□ 0.79
TRIM3O75382 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM3O75382 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.01■□□□□ 0.79
TRIM3O75382 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM3O75382 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM3O75382 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM3O75382 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM3O75382 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM3O75382 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM3O75382 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TRIM3O75382 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM3O75382 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM3O75382 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM3O75382 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
TRIM3O75382 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM3O75382 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRIM3O75382 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20■□□□□ 0.79
TRIM3O75382 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms