Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH16O75309 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH16O75309 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDH16O75309 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.81■■□□□ 1.08
CDH16O75309 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH16O75309 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.81■■□□□ 1.08
CDH16O75309 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH16O75309 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDH16O75309 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.81■■□□□ 1.08
CDH16O75309 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDH16O75309 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH16O75309 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH16O75309 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.8■■□□□ 1.08
CDH16O75309 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH16O75309 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDH16O75309 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.8■■□□□ 1.08
CDH16O75309 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.8■■□□□ 1.08
CDH16O75309 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH16O75309 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
CDH16O75309 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.8■■□□□ 1.08
CDH16O75309 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.8■■□□□ 1.08
CDH16O75309 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH16O75309 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH16O75309 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDH16O75309 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDH16O75309 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
CDH16O75309 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH16O75309 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH16O75309 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH16O75309 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDH16O75309 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH16O75309 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH16O75309 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDH16O75309 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.79■■□□□ 1.08
CDH16O75309 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.79■■□□□ 1.08
CDH16O75309 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDH16O75309 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CDH16O75309 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.79■■□□□ 1.08
CDH16O75309 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.79■■□□□ 1.08
CDH16O75309 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.79■■□□□ 1.08
CDH16O75309 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CDH16O75309 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.79■■□□□ 1.08
CDH16O75309 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDH16O75309 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH16O75309 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.78■■□□□ 1.08
CDH16O75309 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDH16O75309 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.78■■□□□ 1.08
CDH16O75309 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDH16O75309 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CDH16O75309 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDH16O75309 YBX1P4-201ENST00000392794 808 ntBASIC21.78■■□□□ 1.08
CDH16O75309 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.78■■□□□ 1.08
CDH16O75309 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.78■■□□□ 1.08
CDH16O75309 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
CDH16O75309 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH16O75309 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.78■■□□□ 1.08
CDH16O75309 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CDH16O75309 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH16O75309 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.77■■□□□ 1.08
CDH16O75309 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH16O75309 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH16O75309 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH16O75309 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.08
CDH16O75309 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH16O75309 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH16O75309 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
CDH16O75309 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH16O75309 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH16O75309 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.77■■□□□ 1.08
CDH16O75309 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDH16O75309 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH16O75309 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDH16O75309 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CDH16O75309 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CDH16O75309 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CDH16O75309 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CDH16O75309 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CDH16O75309 AL157384.1-201ENST00000445995 2473 ntBASIC21.77■■□□□ 1.07
CDH16O75309 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
CDH16O75309 LINC01521-201ENST00000504184 1943 ntBASIC21.76■■□□□ 1.07
CDH16O75309 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH16O75309 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH16O75309 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH16O75309 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
CDH16O75309 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CDH16O75309 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.76■■□□□ 1.07
CDH16O75309 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH16O75309 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH16O75309 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH16O75309 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH16O75309 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH16O75309 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.76■■□□□ 1.07
CDH16O75309 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.76■■□□□ 1.07
CDH16O75309 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.76■■□□□ 1.07
CDH16O75309 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDH16O75309 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDH16O75309 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH16O75309 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH16O75309 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CDH16O75309 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms