Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC24.59■■□□□ 1.53
CCNT1O60563 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CCNT1O60563 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC24.59■■□□□ 1.53
CCNT1O60563 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCNT1O60563 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
CCNT1O60563 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCNT1O60563 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CCNT1O60563 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCNT1O60563 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
CCNT1O60563 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
CCNT1O60563 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCNT1O60563 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.58■■□□□ 1.53
CCNT1O60563 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCNT1O60563 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.58■■□□□ 1.53
CCNT1O60563 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
CCNT1O60563 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
CCNT1O60563 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
CCNT1O60563 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
CCNT1O60563 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
CCNT1O60563 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCNT1O60563 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC24.57■■□□□ 1.52
CCNT1O60563 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCNT1O60563 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.57■■□□□ 1.52
CCNT1O60563 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCNT1O60563 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC24.57■■□□□ 1.52
CCNT1O60563 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.57■■□□□ 1.52
CCNT1O60563 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCNT1O60563 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CCNT1O60563 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCNT1O60563 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCNT1O60563 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
CCNT1O60563 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
CCNT1O60563 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.56■■□□□ 1.52
CCNT1O60563 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.56■■□□□ 1.52
CCNT1O60563 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
CCNT1O60563 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC24.56■■□□□ 1.52
CCNT1O60563 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC24.56■■□□□ 1.52
CCNT1O60563 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCNT1O60563 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCNT1O60563 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CCNT1O60563 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CCNT1O60563 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CCNT1O60563 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
CCNT1O60563 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCNT1O60563 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC24.55■■□□□ 1.52
CCNT1O60563 AC092053.2-201ENST00000640557 1818 ntBASIC24.55■■□□□ 1.52
CCNT1O60563 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCNT1O60563 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CCNT1O60563 AC019069.1-201ENST00000610008 1333 ntBASIC24.55■■□□□ 1.52
CCNT1O60563 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC24.55■■□□□ 1.52
CCNT1O60563 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCNT1O60563 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCNT1O60563 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCNT1O60563 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CCNT1O60563 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCNT1O60563 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
CCNT1O60563 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.54■■□□□ 1.52
CCNT1O60563 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CCNT1O60563 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CCNT1O60563 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCNT1O60563 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.54■■□□□ 1.52
CCNT1O60563 GUK1-205ENST00000366722 850 ntTSL 3 BASIC24.54■■□□□ 1.52
CCNT1O60563 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC24.54■■□□□ 1.52
CCNT1O60563 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.54■■□□□ 1.52
CCNT1O60563 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCNT1O60563 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CCNT1O60563 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCNT1O60563 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCNT1O60563 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CCNT1O60563 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCNT1O60563 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCNT1O60563 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CCNT1O60563 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.53■■□□□ 1.52
CCNT1O60563 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCNT1O60563 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCNT1O60563 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.53■■□□□ 1.52
CCNT1O60563 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.53■■□□□ 1.52
CCNT1O60563 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.53■■□□□ 1.52
CCNT1O60563 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
CCNT1O60563 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC24.53■■□□□ 1.52
CCNT1O60563 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCNT1O60563 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.52■■□□□ 1.52
CCNT1O60563 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC24.52■■□□□ 1.52
CCNT1O60563 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
CCNT1O60563 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCNT1O60563 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
CCNT1O60563 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC24.52■■□□□ 1.52
CCNT1O60563 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.52■■□□□ 1.52
CCNT1O60563 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.52■■□□□ 1.52
CCNT1O60563 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC24.52■■□□□ 1.52
CCNT1O60563 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.52■■□□□ 1.52
CCNT1O60563 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCNT1O60563 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCNT1O60563 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC24.52■■□□□ 1.52
CCNT1O60563 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCNT1O60563 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CCNT1O60563 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCNT1O60563 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCNT1O60563 ASL-203ENST00000380839 1765 ntTSL 5 BASIC24.52■■□□□ 1.52
CCNT1O60563 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms