Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.71■□□□□ 0.91
LCMT2O60294 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LCMT2O60294 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LCMT2O60294 AC105233.4-201ENST00000642045 216 ntBASIC20.71■□□□□ 0.91
LCMT2O60294 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.71■□□□□ 0.91
LCMT2O60294 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
LCMT2O60294 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.71■□□□□ 0.91
LCMT2O60294 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.71■□□□□ 0.91
LCMT2O60294 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.71■□□□□ 0.91
LCMT2O60294 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
LCMT2O60294 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LCMT2O60294 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LCMT2O60294 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
LCMT2O60294 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
LCMT2O60294 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LCMT2O60294 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LCMT2O60294 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LCMT2O60294 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LCMT2O60294 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LCMT2O60294 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.7■□□□□ 0.9
LCMT2O60294 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.69■□□□□ 0.9
LCMT2O60294 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LCMT2O60294 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LCMT2O60294 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LCMT2O60294 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
LCMT2O60294 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LCMT2O60294 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LCMT2O60294 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LCMT2O60294 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LCMT2O60294 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LCMT2O60294 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.69■□□□□ 0.9
LCMT2O60294 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.69■□□□□ 0.9
LCMT2O60294 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.69■□□□□ 0.9
LCMT2O60294 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.69■□□□□ 0.9
LCMT2O60294 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
LCMT2O60294 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LCMT2O60294 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
LCMT2O60294 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.68■□□□□ 0.9
LCMT2O60294 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LCMT2O60294 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LCMT2O60294 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LCMT2O60294 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LCMT2O60294 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
LCMT2O60294 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.68■□□□□ 0.9
LCMT2O60294 AC092053.2-201ENST00000640557 1818 ntBASIC20.68■□□□□ 0.9
LCMT2O60294 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LCMT2O60294 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.68■□□□□ 0.9
LCMT2O60294 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LCMT2O60294 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
LCMT2O60294 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LCMT2O60294 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.67■□□□□ 0.9
LCMT2O60294 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.67■□□□□ 0.9
LCMT2O60294 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LCMT2O60294 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
LCMT2O60294 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LCMT2O60294 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LCMT2O60294 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LCMT2O60294 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LCMT2O60294 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LCMT2O60294 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LCMT2O60294 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.67■□□□□ 0.9
LCMT2O60294 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.67■□□□□ 0.9
LCMT2O60294 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LCMT2O60294 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LCMT2O60294 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LCMT2O60294 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LCMT2O60294 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LCMT2O60294 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LCMT2O60294 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LCMT2O60294 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
LCMT2O60294 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.66■□□□□ 0.9
LCMT2O60294 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LCMT2O60294 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.66■□□□□ 0.9
LCMT2O60294 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.66■□□□□ 0.9
LCMT2O60294 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
LCMT2O60294 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.66■□□□□ 0.9
LCMT2O60294 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.66■□□□□ 0.9
LCMT2O60294 AC019069.1-201ENST00000610008 1333 ntBASIC20.66■□□□□ 0.9
LCMT2O60294 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LCMT2O60294 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.66■□□□□ 0.9
LCMT2O60294 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LCMT2O60294 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.66■□□□□ 0.9
LCMT2O60294 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LCMT2O60294 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.66■□□□□ 0.9
LCMT2O60294 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LCMT2O60294 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.65■□□□□ 0.9
LCMT2O60294 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LCMT2O60294 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LCMT2O60294 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LCMT2O60294 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.65■□□□□ 0.9
LCMT2O60294 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.65■□□□□ 0.9
LCMT2O60294 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LCMT2O60294 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LCMT2O60294 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.65■□□□□ 0.9
LCMT2O60294 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
LCMT2O60294 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LCMT2O60294 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.65■□□□□ 0.9
LCMT2O60294 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LCMT2O60294 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LCMT2O60294 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms