Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC009086.3-201ENST00000623486 1008 ntBASIC17.59■□□□□ 0.41
SSSCA1O60232 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSSCA1O60232 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.59■□□□□ 0.41
SSSCA1O60232 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SSSCA1O60232 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SSSCA1O60232 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
SSSCA1O60232 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SSSCA1O60232 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SSSCA1O60232 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.58■□□□□ 0.4
SSSCA1O60232 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SSSCA1O60232 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSSCA1O60232 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSSCA1O60232 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SSSCA1O60232 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSSCA1O60232 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
SSSCA1O60232 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.57■□□□□ 0.4
SSSCA1O60232 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSSCA1O60232 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SSSCA1O60232 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.57■□□□□ 0.4
SSSCA1O60232 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSSCA1O60232 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SSSCA1O60232 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SSSCA1O60232 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSSCA1O60232 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SSSCA1O60232 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.57■□□□□ 0.4
SSSCA1O60232 U85056.1-201ENST00000616429 682 ntBASIC17.57■□□□□ 0.4
SSSCA1O60232 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.57■□□□□ 0.4
SSSCA1O60232 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSSCA1O60232 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SSSCA1O60232 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.57■□□□□ 0.4
SSSCA1O60232 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSSCA1O60232 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSSCA1O60232 FEM1AP4-201ENST00000443167 1987 ntBASIC17.57■□□□□ 0.4
SSSCA1O60232 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SSSCA1O60232 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SSSCA1O60232 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.56■□□□□ 0.4
SSSCA1O60232 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSSCA1O60232 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SSSCA1O60232 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSSCA1O60232 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSSCA1O60232 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSSCA1O60232 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
SSSCA1O60232 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSSCA1O60232 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSSCA1O60232 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.56■□□□□ 0.4
SSSCA1O60232 KRT18P24-201ENST00000344739 1156 ntBASIC17.56■□□□□ 0.4
SSSCA1O60232 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSSCA1O60232 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSSCA1O60232 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSSCA1O60232 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSSCA1O60232 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSSCA1O60232 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.56■□□□□ 0.4
SSSCA1O60232 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.56■□□□□ 0.4
SSSCA1O60232 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSSCA1O60232 FP325331.1-202ENST00000623531 1380 ntBASIC17.55■□□□□ 0.4
SSSCA1O60232 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSSCA1O60232 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSSCA1O60232 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSSCA1O60232 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSSCA1O60232 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSSCA1O60232 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
SSSCA1O60232 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSSCA1O60232 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.55■□□□□ 0.4
SSSCA1O60232 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SSSCA1O60232 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SSSCA1O60232 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSSCA1O60232 AL121603.2-201ENST00000557373 2117 ntBASIC17.54■□□□□ 0.4
SSSCA1O60232 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSSCA1O60232 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSSCA1O60232 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.54■□□□□ 0.4
SSSCA1O60232 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.54■□□□□ 0.4
SSSCA1O60232 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSSCA1O60232 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSSCA1O60232 KRT18P60-201ENST00000312876 1297 ntBASIC17.54■□□□□ 0.4
SSSCA1O60232 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SSSCA1O60232 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.54■□□□□ 0.4
SSSCA1O60232 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.54■□□□□ 0.4
SSSCA1O60232 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSSCA1O60232 LINC01521-201ENST00000504184 1943 ntBASIC17.54■□□□□ 0.4
SSSCA1O60232 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SSSCA1O60232 AC092667.1-201ENST00000434301 2586 ntBASIC17.54■□□□□ 0.4
SSSCA1O60232 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSSCA1O60232 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SSSCA1O60232 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSSCA1O60232 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSSCA1O60232 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SSSCA1O60232 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSSCA1O60232 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SSSCA1O60232 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSSCA1O60232 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSSCA1O60232 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSSCA1O60232 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSSCA1O60232 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.53■□□□□ 0.4
SSSCA1O60232 DUX4L18-201ENST00000553347 1267 ntBASIC17.53■□□□□ 0.4
SSSCA1O60232 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSSCA1O60232 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSSCA1O60232 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.53■□□□□ 0.4
SSSCA1O60232 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSSCA1O60232 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSSCA1O60232 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms