Protein–RNA interactions for Protein: O43657

TSPAN6, Tetraspanin-6, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6O43657 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TSPAN6O43657 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TSPAN6O43657 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TSPAN6O43657 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.61■■□□□ 1.05
TSPAN6O43657 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TSPAN6O43657 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.61■■□□□ 1.05
TSPAN6O43657 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
TSPAN6O43657 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.61■■□□□ 1.05
TSPAN6O43657 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
TSPAN6O43657 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.6■■□□□ 1.05
TSPAN6O43657 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TSPAN6O43657 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TSPAN6O43657 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TSPAN6O43657 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TSPAN6O43657 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TSPAN6O43657 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.6■■□□□ 1.05
TSPAN6O43657 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.6■■□□□ 1.05
TSPAN6O43657 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.6■■□□□ 1.05
TSPAN6O43657 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.6■■□□□ 1.05
TSPAN6O43657 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TSPAN6O43657 AC005224.4-201ENST00000583262 1652 ntBASIC21.6■■□□□ 1.05
TSPAN6O43657 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.59■■□□□ 1.05
TSPAN6O43657 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TSPAN6O43657 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
TSPAN6O43657 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TSPAN6O43657 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TSPAN6O43657 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TSPAN6O43657 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TSPAN6O43657 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.59■■□□□ 1.05
TSPAN6O43657 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.59■■□□□ 1.05
TSPAN6O43657 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.59■■□□□ 1.05
TSPAN6O43657 AL137784.2-201ENST00000607332 1000 ntBASIC21.59■■□□□ 1.05
TSPAN6O43657 IKBKGP1-201ENST00000612193 1073 ntBASIC21.59■■□□□ 1.05
TSPAN6O43657 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
TSPAN6O43657 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TSPAN6O43657 AC068473.5-201ENST00000616428 2072 ntBASIC21.59■■□□□ 1.05
TSPAN6O43657 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.58■■□□□ 1.05
TSPAN6O43657 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.58■■□□□ 1.05
TSPAN6O43657 OR7E47P-201ENST00000546390 1422 ntBASIC21.58■■□□□ 1.05
TSPAN6O43657 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
TSPAN6O43657 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.58■■□□□ 1.05
TSPAN6O43657 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.58■■□□□ 1.05
TSPAN6O43657 AC079140.4-201ENST00000507448 529 ntBASIC21.58■■□□□ 1.05
TSPAN6O43657 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.58■■□□□ 1.05
TSPAN6O43657 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.58■■□□□ 1.05
TSPAN6O43657 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.58■■□□□ 1.05
TSPAN6O43657 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.58■■□□□ 1.05
TSPAN6O43657 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
TSPAN6O43657 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TSPAN6O43657 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TSPAN6O43657 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
TSPAN6O43657 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TSPAN6O43657 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TSPAN6O43657 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TSPAN6O43657 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.57■■□□□ 1.04
TSPAN6O43657 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.57■■□□□ 1.04
TSPAN6O43657 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.57■■□□□ 1.04
TSPAN6O43657 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.57■■□□□ 1.04
TSPAN6O43657 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.57■■□□□ 1.04
TSPAN6O43657 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TSPAN6O43657 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TSPAN6O43657 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TSPAN6O43657 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TSPAN6O43657 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
TSPAN6O43657 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
TSPAN6O43657 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.57■■□□□ 1.04
TSPAN6O43657 AP004607.4-201ENST00000530158 1459 ntBASIC21.57■■□□□ 1.04
TSPAN6O43657 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
TSPAN6O43657 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
TSPAN6O43657 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TSPAN6O43657 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.56■■□□□ 1.04
TSPAN6O43657 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.56■■□□□ 1.04
TSPAN6O43657 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TSPAN6O43657 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TSPAN6O43657 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TSPAN6O43657 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.56■■□□□ 1.04
TSPAN6O43657 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.56■■□□□ 1.04
TSPAN6O43657 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.56■■□□□ 1.04
TSPAN6O43657 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TSPAN6O43657 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.56■■□□□ 1.04
TSPAN6O43657 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.56■■□□□ 1.04
TSPAN6O43657 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TSPAN6O43657 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.56■■□□□ 1.04
TSPAN6O43657 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.55■■□□□ 1.04
TSPAN6O43657 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TSPAN6O43657 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TSPAN6O43657 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TSPAN6O43657 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TSPAN6O43657 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TSPAN6O43657 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TSPAN6O43657 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
TSPAN6O43657 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.55■■□□□ 1.04
TSPAN6O43657 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
TSPAN6O43657 AL034346.1-201ENST00000568244 1277 ntBASIC21.55■■□□□ 1.04
TSPAN6O43657 AC092437.1-201ENST00000624794 1048 ntBASIC21.55■■□□□ 1.04
TSPAN6O43657 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
TSPAN6O43657 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TSPAN6O43657 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TSPAN6O43657 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TSPAN6O43657 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms