Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
AP3D1O14617 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP3D1O14617 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.13■□□□□ 0.81
AP3D1O14617 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.13■□□□□ 0.81
AP3D1O14617 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP3D1O14617 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.13■□□□□ 0.81
AP3D1O14617 SRD5A1P1-201ENST00000442297 786 ntBASIC20.13■□□□□ 0.81
AP3D1O14617 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP3D1O14617 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.13■□□□□ 0.81
AP3D1O14617 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP3D1O14617 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
AP3D1O14617 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
AP3D1O14617 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP3D1O14617 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP3D1O14617 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP3D1O14617 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.12■□□□□ 0.81
AP3D1O14617 pRNA.6-201ENST00000610482 90 ntBASIC20.12■□□□□ 0.81
AP3D1O14617 pRNA.5-201ENST00000612139 90 ntBASIC20.12■□□□□ 0.81
AP3D1O14617 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.12■□□□□ 0.81
AP3D1O14617 pRNA.11-201ENST00000618423 90 ntBASIC20.12■□□□□ 0.81
AP3D1O14617 pRNA.13-201ENST00000619112 90 ntBASIC20.12■□□□□ 0.81
AP3D1O14617 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.12■□□□□ 0.81
AP3D1O14617 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.12■□□□□ 0.81
AP3D1O14617 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP3D1O14617 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP3D1O14617 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP3D1O14617 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
AP3D1O14617 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
AP3D1O14617 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP3D1O14617 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
AP3D1O14617 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
AP3D1O14617 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.11■□□□□ 0.81
AP3D1O14617 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP3D1O14617 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
AP3D1O14617 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP3D1O14617 AC131281.2-201ENST00000520478 145 ntBASIC20.11■□□□□ 0.81
AP3D1O14617 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.11■□□□□ 0.81
AP3D1O14617 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.11■□□□□ 0.81
AP3D1O14617 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
AP3D1O14617 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP3D1O14617 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.11■□□□□ 0.81
AP3D1O14617 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.11■□□□□ 0.81
AP3D1O14617 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.1■□□□□ 0.81
AP3D1O14617 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
AP3D1O14617 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP3D1O14617 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP3D1O14617 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP3D1O14617 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP3D1O14617 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.1■□□□□ 0.81
AP3D1O14617 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP3D1O14617 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP3D1O14617 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.1■□□□□ 0.81
AP3D1O14617 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
AP3D1O14617 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
AP3D1O14617 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.1■□□□□ 0.81
AP3D1O14617 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
AP3D1O14617 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.1■□□□□ 0.81
AP3D1O14617 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
AP3D1O14617 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
AP3D1O14617 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
AP3D1O14617 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP3D1O14617 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP3D1O14617 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.1■□□□□ 0.81
AP3D1O14617 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP3D1O14617 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP3D1O14617 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP3D1O14617 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP3D1O14617 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.09■□□□□ 0.81
AP3D1O14617 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.09■□□□□ 0.81
AP3D1O14617 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP3D1O14617 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
AP3D1O14617 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.09■□□□□ 0.81
AP3D1O14617 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.09■□□□□ 0.81
AP3D1O14617 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.09■□□□□ 0.81
AP3D1O14617 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
AP3D1O14617 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
AP3D1O14617 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
AP3D1O14617 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
AP3D1O14617 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
AP3D1O14617 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
AP3D1O14617 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
AP3D1O14617 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
AP3D1O14617 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
AP3D1O14617 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
AP3D1O14617 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
AP3D1O14617 MIR3181-201ENST00000578512 73 ntBASIC20.08■□□□□ 0.81
AP3D1O14617 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
AP3D1O14617 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.08■□□□□ 0.8
AP3D1O14617 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
AP3D1O14617 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
AP3D1O14617 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
AP3D1O14617 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.08■□□□□ 0.8
AP3D1O14617 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
AP3D1O14617 AC133637.1-201ENST00000624115 1537 ntBASIC20.07■□□□□ 0.8
AP3D1O14617 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
AP3D1O14617 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.07■□□□□ 0.8
AP3D1O14617 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.07■□□□□ 0.8
AP3D1O14617 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.07■□□□□ 0.8
AP3D1O14617 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.07■□□□□ 0.8
AP3D1O14617 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms