Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBFD1O14562 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.01■□□□□ 0.95
UBFD1O14562 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.01■□□□□ 0.95
UBFD1O14562 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBFD1O14562 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.01■□□□□ 0.95
UBFD1O14562 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBFD1O14562 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.01■□□□□ 0.95
UBFD1O14562 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.01■□□□□ 0.95
UBFD1O14562 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21■□□□□ 0.95
UBFD1O14562 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
UBFD1O14562 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
UBFD1O14562 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21■□□□□ 0.95
UBFD1O14562 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21■□□□□ 0.95
UBFD1O14562 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBFD1O14562 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
UBFD1O14562 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
UBFD1O14562 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
UBFD1O14562 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
UBFD1O14562 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21■□□□□ 0.95
UBFD1O14562 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21■□□□□ 0.95
UBFD1O14562 MIR3181-201ENST00000578512 73 ntBASIC21■□□□□ 0.95
UBFD1O14562 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21■□□□□ 0.95
UBFD1O14562 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21■□□□□ 0.95
UBFD1O14562 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21■□□□□ 0.95
UBFD1O14562 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBFD1O14562 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBFD1O14562 Z98882.1-201ENST00000622160 2253 ntBASIC20.99■□□□□ 0.95
UBFD1O14562 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
UBFD1O14562 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBFD1O14562 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.99■□□□□ 0.95
UBFD1O14562 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.99■□□□□ 0.95
UBFD1O14562 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.99■□□□□ 0.95
UBFD1O14562 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBFD1O14562 MIR3621-201ENST00000580529 85 ntBASIC20.99■□□□□ 0.95
UBFD1O14562 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
UBFD1O14562 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBFD1O14562 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBFD1O14562 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBFD1O14562 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.99■□□□□ 0.95
UBFD1O14562 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBFD1O14562 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBFD1O14562 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
UBFD1O14562 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBFD1O14562 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.98■□□□□ 0.95
UBFD1O14562 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.98■□□□□ 0.95
UBFD1O14562 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.98■□□□□ 0.95
UBFD1O14562 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBFD1O14562 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
UBFD1O14562 GUSBP5-201ENST00000418136 578 ntBASIC20.98■□□□□ 0.95
UBFD1O14562 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.98■□□□□ 0.95
UBFD1O14562 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.98■□□□□ 0.95
UBFD1O14562 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBFD1O14562 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBFD1O14562 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBFD1O14562 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBFD1O14562 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
UBFD1O14562 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBFD1O14562 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.97■□□□□ 0.95
UBFD1O14562 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBFD1O14562 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBFD1O14562 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBFD1O14562 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBFD1O14562 AL356740.2-201ENST00000601559 647 ntBASIC20.97■□□□□ 0.95
UBFD1O14562 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.97■□□□□ 0.95
UBFD1O14562 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBFD1O14562 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
UBFD1O14562 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBFD1O14562 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBFD1O14562 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
UBFD1O14562 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.96■□□□□ 0.95
UBFD1O14562 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBFD1O14562 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBFD1O14562 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBFD1O14562 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UBFD1O14562 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.96■□□□□ 0.95
UBFD1O14562 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
UBFD1O14562 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBFD1O14562 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.95
UBFD1O14562 AF106564.1-201ENST00000607058 2553 ntBASIC20.95■□□□□ 0.95
UBFD1O14562 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
UBFD1O14562 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.95■□□□□ 0.94
UBFD1O14562 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UBFD1O14562 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBFD1O14562 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
UBFD1O14562 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.95■□□□□ 0.94
UBFD1O14562 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBFD1O14562 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBFD1O14562 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.95■□□□□ 0.94
UBFD1O14562 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.94■□□□□ 0.94
UBFD1O14562 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
UBFD1O14562 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.94■□□□□ 0.94
UBFD1O14562 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.94■□□□□ 0.94
UBFD1O14562 AL512631.2-201ENST00000604634 923 ntBASIC20.94■□□□□ 0.94
UBFD1O14562 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.94■□□□□ 0.94
UBFD1O14562 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UBFD1O14562 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBFD1O14562 OR7E47P-201ENST00000546390 1422 ntBASIC20.94■□□□□ 0.94
UBFD1O14562 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UBFD1O14562 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.94■□□□□ 0.94
UBFD1O14562 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms