Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KPNA4O00629 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KPNA4O00629 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KPNA4O00629 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KPNA4O00629 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
KPNA4O00629 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KPNA4O00629 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.1■□□□□ 0.81
KPNA4O00629 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KPNA4O00629 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
KPNA4O00629 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.1■□□□□ 0.81
KPNA4O00629 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KPNA4O00629 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KPNA4O00629 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
KPNA4O00629 FP325331.1-202ENST00000623531 1380 ntBASIC20.09■□□□□ 0.81
KPNA4O00629 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KPNA4O00629 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
KPNA4O00629 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KPNA4O00629 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KPNA4O00629 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KPNA4O00629 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.09■□□□□ 0.81
KPNA4O00629 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KPNA4O00629 AC080038.3-201ENST00000623346 1952 ntBASIC20.09■□□□□ 0.81
KPNA4O00629 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KPNA4O00629 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KPNA4O00629 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
KPNA4O00629 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.09■□□□□ 0.81
KPNA4O00629 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
KPNA4O00629 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
KPNA4O00629 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
KPNA4O00629 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KPNA4O00629 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KPNA4O00629 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
KPNA4O00629 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KPNA4O00629 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
KPNA4O00629 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
KPNA4O00629 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
KPNA4O00629 AC087742.1-201ENST00000575880 1738 ntBASIC20.08■□□□□ 0.81
KPNA4O00629 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KPNA4O00629 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
KPNA4O00629 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KPNA4O00629 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KPNA4O00629 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
KPNA4O00629 UNC93B8-201ENST00000511903 705 ntBASIC20.08■□□□□ 0.81
KPNA4O00629 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
KPNA4O00629 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.08■□□□□ 0.8
KPNA4O00629 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
KPNA4O00629 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
KPNA4O00629 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
KPNA4O00629 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KPNA4O00629 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
KPNA4O00629 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.07■□□□□ 0.8
KPNA4O00629 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
KPNA4O00629 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KPNA4O00629 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KPNA4O00629 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.07■□□□□ 0.8
KPNA4O00629 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
KPNA4O00629 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.07■□□□□ 0.8
KPNA4O00629 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
KPNA4O00629 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
KPNA4O00629 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KPNA4O00629 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
KPNA4O00629 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
KPNA4O00629 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
KPNA4O00629 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KPNA4O00629 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.06■□□□□ 0.8
KPNA4O00629 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KPNA4O00629 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
KPNA4O00629 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KPNA4O00629 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.06■□□□□ 0.8
KPNA4O00629 AC009086.3-201ENST00000623486 1008 ntBASIC20.06■□□□□ 0.8
KPNA4O00629 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KPNA4O00629 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
KPNA4O00629 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
KPNA4O00629 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
KPNA4O00629 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KPNA4O00629 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KPNA4O00629 AC004687.1-201ENST00000579003 1625 ntBASIC20.05■□□□□ 0.8
KPNA4O00629 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.05■□□□□ 0.8
KPNA4O00629 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KPNA4O00629 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.05■□□□□ 0.8
KPNA4O00629 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
KPNA4O00629 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KPNA4O00629 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KPNA4O00629 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.05■□□□□ 0.8
KPNA4O00629 DUX4L4-201ENST00000566884 1269 ntBASIC20.05■□□□□ 0.8
KPNA4O00629 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KPNA4O00629 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
KPNA4O00629 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KPNA4O00629 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KPNA4O00629 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KPNA4O00629 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KPNA4O00629 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KPNA4O00629 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KPNA4O00629 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.04■□□□□ 0.8
KPNA4O00629 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KPNA4O00629 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
KPNA4O00629 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KPNA4O00629 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KPNA4O00629 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.04■□□□□ 0.8
KPNA4O00629 LINC01960-201ENST00000563759 1884 ntBASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms