Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
IFRD1O00458 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
IFRD1O00458 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
IFRD1O00458 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
IFRD1O00458 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
IFRD1O00458 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
IFRD1O00458 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
IFRD1O00458 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IFRD1O00458 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IFRD1O00458 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
IFRD1O00458 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.31■■□□□ 1
IFRD1O00458 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.31■■□□□ 1
IFRD1O00458 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IFRD1O00458 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IFRD1O00458 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IFRD1O00458 IRS3P-201ENST00000223076 1006 ntBASIC21.31■■□□□ 1
IFRD1O00458 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.31■■□□□ 1
IFRD1O00458 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.31■■□□□ 1
IFRD1O00458 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
IFRD1O00458 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IFRD1O00458 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
IFRD1O00458 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.31■■□□□ 1
IFRD1O00458 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.31■■□□□ 1
IFRD1O00458 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
IFRD1O00458 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.3■■□□□ 1
IFRD1O00458 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IFRD1O00458 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
IFRD1O00458 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
IFRD1O00458 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
IFRD1O00458 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
IFRD1O00458 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IFRD1O00458 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.3■■□□□ 1
IFRD1O00458 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.3■■□□□ 1
IFRD1O00458 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.3■■□□□ 1
IFRD1O00458 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.3■■□□□ 1
IFRD1O00458 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.3■■□□□ 1
IFRD1O00458 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.3■■□□□ 1
IFRD1O00458 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.3■■□□□ 1
IFRD1O00458 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.3■■□□□ 1
IFRD1O00458 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IFRD1O00458 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IFRD1O00458 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.3■■□□□ 1
IFRD1O00458 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IFRD1O00458 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
IFRD1O00458 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
IFRD1O00458 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
IFRD1O00458 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IFRD1O00458 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IFRD1O00458 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IFRD1O00458 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.29■■□□□ 1
IFRD1O00458 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.29■■□□□ 1
IFRD1O00458 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
IFRD1O00458 ZNRF2P3-201ENST00000424200 374 ntBASIC21.29■■□□□ 1
IFRD1O00458 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.29■■□□□ 1
IFRD1O00458 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.29■■□□□ 1
IFRD1O00458 OXCT2P1-201ENST00000447263 1535 ntBASIC21.29■■□□□ 1
IFRD1O00458 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.29■■□□□ 1
IFRD1O00458 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.29■■□□□ 1
IFRD1O00458 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
IFRD1O00458 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
IFRD1O00458 MIR572-201ENST00000384983 95 ntBASIC21.28■■□□□ 1
IFRD1O00458 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.28■■□□□ 1
IFRD1O00458 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.28■■□□□ 1
IFRD1O00458 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.28■■□□□ 1
IFRD1O00458 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
IFRD1O00458 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
IFRD1O00458 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
IFRD1O00458 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.28■■□□□ 1
IFRD1O00458 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
IFRD1O00458 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.27■■□□□ 1
IFRD1O00458 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.27■■□□□ 1
IFRD1O00458 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
IFRD1O00458 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.27■■□□□ 1
IFRD1O00458 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
IFRD1O00458 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.27■■□□□ 1
IFRD1O00458 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
IFRD1O00458 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
IFRD1O00458 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
IFRD1O00458 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
IFRD1O00458 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
IFRD1O00458 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
IFRD1O00458 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
IFRD1O00458 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
IFRD1O00458 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
IFRD1O00458 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
IFRD1O00458 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
IFRD1O00458 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.26■□□□□ 0.99
IFRD1O00458 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
IFRD1O00458 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
IFRD1O00458 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.26■□□□□ 0.99
IFRD1O00458 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
IFRD1O00458 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
IFRD1O00458 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
IFRD1O00458 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
IFRD1O00458 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
IFRD1O00458 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
IFRD1O00458 AC092053.2-201ENST00000640557 1818 ntBASIC21.25■□□□□ 0.99
IFRD1O00458 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
IFRD1O00458 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
IFRD1O00458 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms