Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM238C9JI98 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.12■□□□□ 0.01
TMEM238C9JI98 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM238C9JI98 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM238C9JI98 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM238C9JI98 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM238C9JI98 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC15.12■□□□□ 0.01
TMEM238C9JI98 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM238C9JI98 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM238C9JI98 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.12■□□□□ 0.01
TMEM238C9JI98 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM238C9JI98 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM238C9JI98 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC15.12■□□□□ 0.01
TMEM238C9JI98 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC15.12■□□□□ 0.01
TMEM238C9JI98 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM238C9JI98 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM238C9JI98 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM238C9JI98 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEM238C9JI98 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM238C9JI98 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM238C9JI98 AC080038.3-201ENST00000623346 1952 ntBASIC15.11■□□□□ 0.01
TMEM238C9JI98 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.11■□□□□ 0.01
TMEM238C9JI98 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM238C9JI98 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM238C9JI98 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM238C9JI98 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM238C9JI98 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TMEM238C9JI98 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM238C9JI98 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
TMEM238C9JI98 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TMEM238C9JI98 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TMEM238C9JI98 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM238C9JI98 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM238C9JI98 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM238C9JI98 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TMEM238C9JI98 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM238C9JI98 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM238C9JI98 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM238C9JI98 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM238C9JI98 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM238C9JI98 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC15.11■□□□□ 0.01
TMEM238C9JI98 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM238C9JI98 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM238C9JI98 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM238C9JI98 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEM238C9JI98 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM238C9JI98 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TMEM238C9JI98 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TMEM238C9JI98 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM238C9JI98 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TMEM238C9JI98 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM238C9JI98 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TMEM238C9JI98 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.1■□□□□ 0.01
TMEM238C9JI98 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TMEM238C9JI98 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM238C9JI98 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM238C9JI98 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEM238C9JI98 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TMEM238C9JI98 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM238C9JI98 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
TMEM238C9JI98 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM238C9JI98 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM238C9JI98 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM238C9JI98 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM238C9JI98 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TMEM238C9JI98 ABHD17AP4-201ENST00000411545 909 ntBASIC15.09■□□□□ 0.01
TMEM238C9JI98 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM238C9JI98 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM238C9JI98 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TMEM238C9JI98 CD37-213ENST00000598095 1598 ntTSL 2 BASIC15.09■□□□□ 0.01
TMEM238C9JI98 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM238C9JI98 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM238C9JI98 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TMEM238C9JI98 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM238C9JI98 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM238C9JI98 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
TMEM238C9JI98 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TMEM238C9JI98 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC15.08■□□□□ 0.01
TMEM238C9JI98 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
TMEM238C9JI98 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.08■□□□□ 0.01
TMEM238C9JI98 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM238C9JI98 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM238C9JI98 GDI1-215ENST00000630693 786 ntTSL 4 BASIC15.08■□□□□ 0
TMEM238C9JI98 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM238C9JI98 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM238C9JI98 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.08■□□□□ 0
TMEM238C9JI98 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.08■□□□□ 0
TMEM238C9JI98 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.08■□□□□ 0
TMEM238C9JI98 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM238C9JI98 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC15.08■□□□□ 0
TMEM238C9JI98 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM238C9JI98 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC15.08■□□□□ 0
TMEM238C9JI98 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM238C9JI98 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM238C9JI98 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM238C9JI98 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM238C9JI98 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.07■□□□□ 0
TMEM238C9JI98 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM238C9JI98 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TMEM238C9JI98 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms