Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 SPCS2P3-201ENST00000500401 656 ntBASIC18.68■□□□□ 0.58
HMX3A6NHT5 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
HMX3A6NHT5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HMX3A6NHT5 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.68■□□□□ 0.58
HMX3A6NHT5 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.68■□□□□ 0.58
HMX3A6NHT5 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMX3A6NHT5 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.68■□□□□ 0.58
HMX3A6NHT5 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
HMX3A6NHT5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMX3A6NHT5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.67■□□□□ 0.58
HMX3A6NHT5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMX3A6NHT5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HMX3A6NHT5 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.67■□□□□ 0.58
HMX3A6NHT5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMX3A6NHT5 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMX3A6NHT5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMX3A6NHT5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HMX3A6NHT5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMX3A6NHT5 KRT18P10-201ENST00000388836 1287 ntBASIC18.67■□□□□ 0.58
HMX3A6NHT5 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HMX3A6NHT5 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HMX3A6NHT5 FEM1AP1-201ENST00000431297 1995 ntBASIC18.67■□□□□ 0.58
HMX3A6NHT5 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HMX3A6NHT5 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HMX3A6NHT5 AC087289.5-201ENST00000586076 3175 ntBASIC18.67■□□□□ 0.58
HMX3A6NHT5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMX3A6NHT5 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.67■□□□□ 0.58
HMX3A6NHT5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HMX3A6NHT5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMX3A6NHT5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMX3A6NHT5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.67■□□□□ 0.58
HMX3A6NHT5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMX3A6NHT5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.66■□□□□ 0.58
HMX3A6NHT5 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMX3A6NHT5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.66■□□□□ 0.58
HMX3A6NHT5 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HMX3A6NHT5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HMX3A6NHT5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMX3A6NHT5 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMX3A6NHT5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HMX3A6NHT5 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.66■□□□□ 0.58
HMX3A6NHT5 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.66■□□□□ 0.58
HMX3A6NHT5 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HMX3A6NHT5 AC018755.3-202ENST00000596210 929 ntBASIC18.66■□□□□ 0.58
HMX3A6NHT5 U85056.1-201ENST00000616429 682 ntBASIC18.66■□□□□ 0.58
HMX3A6NHT5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
HMX3A6NHT5 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMX3A6NHT5 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.66■□□□□ 0.58
HMX3A6NHT5 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.66■□□□□ 0.58
HMX3A6NHT5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.66■□□□□ 0.58
HMX3A6NHT5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMX3A6NHT5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMX3A6NHT5 Z98882.1-201ENST00000622160 2253 ntBASIC18.66■□□□□ 0.58
HMX3A6NHT5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMX3A6NHT5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HMX3A6NHT5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMX3A6NHT5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMX3A6NHT5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
HMX3A6NHT5 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.65■□□□□ 0.58
HMX3A6NHT5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMX3A6NHT5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMX3A6NHT5 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.65■□□□□ 0.58
HMX3A6NHT5 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HMX3A6NHT5 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.65■□□□□ 0.58
HMX3A6NHT5 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMX3A6NHT5 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
HMX3A6NHT5 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMX3A6NHT5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMX3A6NHT5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMX3A6NHT5 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMX3A6NHT5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMX3A6NHT5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HMX3A6NHT5 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HMX3A6NHT5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMX3A6NHT5 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMX3A6NHT5 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMX3A6NHT5 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HMX3A6NHT5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMX3A6NHT5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMX3A6NHT5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HMX3A6NHT5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.64■□□□□ 0.57
HMX3A6NHT5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMX3A6NHT5 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMX3A6NHT5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMX3A6NHT5 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMX3A6NHT5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMX3A6NHT5 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMX3A6NHT5 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.63■□□□□ 0.57
HMX3A6NHT5 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMX3A6NHT5 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
HMX3A6NHT5 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.63■□□□□ 0.57
HMX3A6NHT5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HMX3A6NHT5 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.63■□□□□ 0.57
HMX3A6NHT5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.63■□□□□ 0.57
HMX3A6NHT5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMX3A6NHT5 ALDH1A3-203ENST00000557963 1670 ntBASIC18.63■□□□□ 0.57
HMX3A6NHT5 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMX3A6NHT5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMX3A6NHT5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.62■□□□□ 0.57
HMX3A6NHT5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms