Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV11-1A0A0K0K1C0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV11-1A0A0K0K1C0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.02■□□□□ 0.8
TRBV11-1A0A0K0K1C0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.02■□□□□ 0.8
TRBV11-1A0A0K0K1C0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TRBV11-1A0A0K0K1C0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV11-1A0A0K0K1C0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.02■□□□□ 0.8
TRBV11-1A0A0K0K1C0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.02■□□□□ 0.8
TRBV11-1A0A0K0K1C0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
TRBV11-1A0A0K0K1C0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.02■□□□□ 0.8
TRBV11-1A0A0K0K1C0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV11-1A0A0K0K1C0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV11-1A0A0K0K1C0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV11-1A0A0K0K1C0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRBV11-1A0A0K0K1C0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
TRBV11-1A0A0K0K1C0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TRBV11-1A0A0K0K1C0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV11-1A0A0K0K1C0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.01■□□□□ 0.79
TRBV11-1A0A0K0K1C0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV11-1A0A0K0K1C0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV11-1A0A0K0K1C0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV11-1A0A0K0K1C0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV11-1A0A0K0K1C0 AC104564.3-201ENST00000582367 638 ntBASIC20.01■□□□□ 0.79
TRBV11-1A0A0K0K1C0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV11-1A0A0K0K1C0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV11-1A0A0K0K1C0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV11-1A0A0K0K1C0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV11-1A0A0K0K1C0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV11-1A0A0K0K1C0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV11-1A0A0K0K1C0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRBV11-1A0A0K0K1C0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20■□□□□ 0.79
TRBV11-1A0A0K0K1C0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20■□□□□ 0.79
TRBV11-1A0A0K0K1C0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV11-1A0A0K0K1C0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20■□□□□ 0.79
TRBV11-1A0A0K0K1C0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV11-1A0A0K0K1C0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20■□□□□ 0.79
TRBV11-1A0A0K0K1C0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20■□□□□ 0.79
TRBV11-1A0A0K0K1C0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV11-1A0A0K0K1C0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV11-1A0A0K0K1C0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV11-1A0A0K0K1C0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20■□□□□ 0.79
TRBV11-1A0A0K0K1C0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRBV11-1A0A0K0K1C0 KRT18P5-201ENST00000436075 1291 ntBASIC20■□□□□ 0.79
TRBV11-1A0A0K0K1C0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRBV11-1A0A0K0K1C0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20■□□□□ 0.79
TRBV11-1A0A0K0K1C0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRBV11-1A0A0K0K1C0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV11-1A0A0K0K1C0 ESRRAP2-201ENST00000418437 1549 ntBASIC20■□□□□ 0.79
TRBV11-1A0A0K0K1C0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20■□□□□ 0.79
TRBV11-1A0A0K0K1C0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV11-1A0A0K0K1C0 AP004607.7-201ENST00000527152 1677 ntBASIC20■□□□□ 0.79
TRBV11-1A0A0K0K1C0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRBV11-1A0A0K0K1C0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV11-1A0A0K0K1C0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV11-1A0A0K0K1C0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV11-1A0A0K0K1C0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV11-1A0A0K0K1C0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.99■□□□□ 0.79
TRBV11-1A0A0K0K1C0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV11-1A0A0K0K1C0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.99■□□□□ 0.79
TRBV11-1A0A0K0K1C0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV11-1A0A0K0K1C0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV11-1A0A0K0K1C0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.99■□□□□ 0.79
TRBV11-1A0A0K0K1C0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.99■□□□□ 0.79
TRBV11-1A0A0K0K1C0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TRBV11-1A0A0K0K1C0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.99■□□□□ 0.79
TRBV11-1A0A0K0K1C0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.99■□□□□ 0.79
TRBV11-1A0A0K0K1C0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV11-1A0A0K0K1C0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.99■□□□□ 0.79
TRBV11-1A0A0K0K1C0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV11-1A0A0K0K1C0 AC009237.3-201ENST00000393279 1427 ntBASIC19.99■□□□□ 0.79
TRBV11-1A0A0K0K1C0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV11-1A0A0K0K1C0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV11-1A0A0K0K1C0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV11-1A0A0K0K1C0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV11-1A0A0K0K1C0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TRBV11-1A0A0K0K1C0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV11-1A0A0K0K1C0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.98■□□□□ 0.79
TRBV11-1A0A0K0K1C0 AC139530.1-201ENST00000575312 1977 ntBASIC19.98■□□□□ 0.79
TRBV11-1A0A0K0K1C0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV11-1A0A0K0K1C0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV11-1A0A0K0K1C0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV11-1A0A0K0K1C0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
TRBV11-1A0A0K0K1C0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.98■□□□□ 0.79
TRBV11-1A0A0K0K1C0 AC092666.2-201ENST00000613287 246 ntBASIC19.98■□□□□ 0.79
TRBV11-1A0A0K0K1C0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.98■□□□□ 0.79
TRBV11-1A0A0K0K1C0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV11-1A0A0K0K1C0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV11-1A0A0K0K1C0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV11-1A0A0K0K1C0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV11-1A0A0K0K1C0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV11-1A0A0K0K1C0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV11-1A0A0K0K1C0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV11-1A0A0K0K1C0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TRBV11-1A0A0K0K1C0 AC005224.4-201ENST00000583262 1652 ntBASIC19.97■□□□□ 0.79
TRBV11-1A0A0K0K1C0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TRBV11-1A0A0K0K1C0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
TRBV11-1A0A0K0K1C0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV11-1A0A0K0K1C0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.97■□□□□ 0.79
TRBV11-1A0A0K0K1C0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.97■□□□□ 0.79
TRBV11-1A0A0K0K1C0 NTF6G-201ENST00000591094 616 ntBASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms