Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC163A0A0D9SF12 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
CCDC163A0A0D9SF12 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.58■■□□□ 1.05
CCDC163A0A0D9SF12 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC163A0A0D9SF12 LINC00543-201ENST00000567234 1845 ntBASIC21.58■■□□□ 1.05
CCDC163A0A0D9SF12 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC163A0A0D9SF12 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.58■■□□□ 1.05
CCDC163A0A0D9SF12 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
CCDC163A0A0D9SF12 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC163A0A0D9SF12 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CCDC163A0A0D9SF12 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC163A0A0D9SF12 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC163A0A0D9SF12 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC163A0A0D9SF12 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CCDC163A0A0D9SF12 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC163A0A0D9SF12 AL139125.2-201ENST00000623134 1869 ntBASIC21.58■■□□□ 1.04
CCDC163A0A0D9SF12 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC163A0A0D9SF12 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC163A0A0D9SF12 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC163A0A0D9SF12 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.57■■□□□ 1.04
CCDC163A0A0D9SF12 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC163A0A0D9SF12 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC163A0A0D9SF12 KRT18P29-201ENST00000397031 1267 ntBASIC21.57■■□□□ 1.04
CCDC163A0A0D9SF12 AC007322.4-201ENST00000509611 723 ntBASIC21.57■■□□□ 1.04
CCDC163A0A0D9SF12 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.57■■□□□ 1.04
CCDC163A0A0D9SF12 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC163A0A0D9SF12 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.57■■□□□ 1.04
CCDC163A0A0D9SF12 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC163A0A0D9SF12 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC163A0A0D9SF12 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.56■■□□□ 1.04
CCDC163A0A0D9SF12 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC163A0A0D9SF12 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC163A0A0D9SF12 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
CCDC163A0A0D9SF12 TERF1P5-201ENST00000477545 1207 ntBASIC21.56■■□□□ 1.04
CCDC163A0A0D9SF12 AC098934.4-201ENST00000564127 592 ntBASIC21.56■■□□□ 1.04
CCDC163A0A0D9SF12 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.56■■□□□ 1.04
CCDC163A0A0D9SF12 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.56■■□□□ 1.04
CCDC163A0A0D9SF12 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC163A0A0D9SF12 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.55■■□□□ 1.04
CCDC163A0A0D9SF12 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC163A0A0D9SF12 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CCDC163A0A0D9SF12 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC163A0A0D9SF12 MIPEPP3-201ENST00000412105 444 ntBASIC21.55■■□□□ 1.04
CCDC163A0A0D9SF12 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CCDC163A0A0D9SF12 OR10C1-204ENST00000622521 1039 ntBASIC21.55■■□□□ 1.04
CCDC163A0A0D9SF12 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC163A0A0D9SF12 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC163A0A0D9SF12 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC163A0A0D9SF12 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC163A0A0D9SF12 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CCDC163A0A0D9SF12 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC163A0A0D9SF12 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CCDC163A0A0D9SF12 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.54■■□□□ 1.04
CCDC163A0A0D9SF12 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC163A0A0D9SF12 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC163A0A0D9SF12 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC163A0A0D9SF12 AL512625.2-201ENST00000417533 625 ntBASIC21.54■■□□□ 1.04
CCDC163A0A0D9SF12 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.54■■□□□ 1.04
CCDC163A0A0D9SF12 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC163A0A0D9SF12 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC163A0A0D9SF12 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC163A0A0D9SF12 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC163A0A0D9SF12 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.54■■□□□ 1.04
CCDC163A0A0D9SF12 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CCDC163A0A0D9SF12 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC163A0A0D9SF12 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC163A0A0D9SF12 AC068338.2-201ENST00000563278 1430 ntBASIC21.54■■□□□ 1.04
CCDC163A0A0D9SF12 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.54■■□□□ 1.04
CCDC163A0A0D9SF12 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC163A0A0D9SF12 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CCDC163A0A0D9SF12 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.53■■□□□ 1.04
CCDC163A0A0D9SF12 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.53■■□□□ 1.04
CCDC163A0A0D9SF12 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CCDC163A0A0D9SF12 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC163A0A0D9SF12 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC163A0A0D9SF12 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
CCDC163A0A0D9SF12 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.53■■□□□ 1.04
CCDC163A0A0D9SF12 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC163A0A0D9SF12 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC163A0A0D9SF12 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC163A0A0D9SF12 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC163A0A0D9SF12 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC163A0A0D9SF12 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC163A0A0D9SF12 MKRN4P-201ENST00000444706 1521 ntBASIC21.52■■□□□ 1.04
CCDC163A0A0D9SF12 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC163A0A0D9SF12 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC163A0A0D9SF12 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC163A0A0D9SF12 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC163A0A0D9SF12 AC092118.2-201ENST00000613495 667 ntBASIC21.52■■□□□ 1.04
CCDC163A0A0D9SF12 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC163A0A0D9SF12 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC163A0A0D9SF12 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
CCDC163A0A0D9SF12 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CCDC163A0A0D9SF12 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
CCDC163A0A0D9SF12 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC163A0A0D9SF12 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.51■■□□□ 1.03
CCDC163A0A0D9SF12 RNA5SP413-201ENST00000516373 109 ntBASIC21.51■■□□□ 1.03
CCDC163A0A0D9SF12 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.51■■□□□ 1.03
CCDC163A0A0D9SF12 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.51■■□□□ 1.03
CCDC163A0A0D9SF12 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms