Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 LINC02228-203ENST00000641970 1355 ntBASIC16.23■□□□□ 0.19
TRAV25A0A0B4J276 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRAV25A0A0B4J276 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV25A0A0B4J276 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV25A0A0B4J276 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV25A0A0B4J276 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV25A0A0B4J276 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV25A0A0B4J276 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV25A0A0B4J276 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV25A0A0B4J276 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV25A0A0B4J276 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV25A0A0B4J276 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRAV25A0A0B4J276 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV25A0A0B4J276 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV25A0A0B4J276 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV25A0A0B4J276 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV25A0A0B4J276 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.22■□□□□ 0.19
TRAV25A0A0B4J276 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV25A0A0B4J276 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRAV25A0A0B4J276 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV25A0A0B4J276 MIR6821-201ENST00000617625 74 ntBASIC16.22■□□□□ 0.19
TRAV25A0A0B4J276 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV25A0A0B4J276 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV25A0A0B4J276 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV25A0A0B4J276 LINC00526-201ENST00000581067 1875 ntBASIC16.22■□□□□ 0.19
TRAV25A0A0B4J276 AC139530.1-201ENST00000575312 1977 ntBASIC16.22■□□□□ 0.19
TRAV25A0A0B4J276 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV25A0A0B4J276 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV25A0A0B4J276 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV25A0A0B4J276 C1orf229-201ENST00000623686 2258 ntBASIC16.21■□□□□ 0.19
TRAV25A0A0B4J276 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV25A0A0B4J276 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRAV25A0A0B4J276 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV25A0A0B4J276 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.21■□□□□ 0.19
TRAV25A0A0B4J276 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV25A0A0B4J276 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV25A0A0B4J276 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRAV25A0A0B4J276 AC097381.1-201ENST00000429019 1296 ntBASIC16.21■□□□□ 0.19
TRAV25A0A0B4J276 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.21■□□□□ 0.19
TRAV25A0A0B4J276 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.21■□□□□ 0.19
TRAV25A0A0B4J276 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV25A0A0B4J276 MIR6084-201ENST00000622012 110 ntBASIC16.21■□□□□ 0.19
TRAV25A0A0B4J276 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV25A0A0B4J276 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV25A0A0B4J276 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV25A0A0B4J276 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV25A0A0B4J276 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRAV25A0A0B4J276 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
TRAV25A0A0B4J276 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV25A0A0B4J276 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV25A0A0B4J276 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRAV25A0A0B4J276 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV25A0A0B4J276 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV25A0A0B4J276 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
TRAV25A0A0B4J276 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV25A0A0B4J276 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV25A0A0B4J276 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV25A0A0B4J276 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV25A0A0B4J276 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV25A0A0B4J276 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.2■□□□□ 0.18
TRAV25A0A0B4J276 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV25A0A0B4J276 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TRAV25A0A0B4J276 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TRAV25A0A0B4J276 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV25A0A0B4J276 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV25A0A0B4J276 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV25A0A0B4J276 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV25A0A0B4J276 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV25A0A0B4J276 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV25A0A0B4J276 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV25A0A0B4J276 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV25A0A0B4J276 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRAV25A0A0B4J276 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRAV25A0A0B4J276 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV25A0A0B4J276 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV25A0A0B4J276 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV25A0A0B4J276 AP004607.7-201ENST00000527152 1677 ntBASIC16.19■□□□□ 0.18
TRAV25A0A0B4J276 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV25A0A0B4J276 RARRES2P6-201ENST00000567333 442 ntBASIC16.19■□□□□ 0.18
TRAV25A0A0B4J276 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV25A0A0B4J276 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.19■□□□□ 0.18
TRAV25A0A0B4J276 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV25A0A0B4J276 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV25A0A0B4J276 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV25A0A0B4J276 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV25A0A0B4J276 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV25A0A0B4J276 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV25A0A0B4J276 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV25A0A0B4J276 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV25A0A0B4J276 LTK-203ENST00000453182 2412 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV25A0A0B4J276 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV25A0A0B4J276 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV25A0A0B4J276 AC012676.1-201ENST00000574705 1949 ntBASIC16.18■□□□□ 0.18
TRAV25A0A0B4J276 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRAV25A0A0B4J276 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV25A0A0B4J276 MIR935-201ENST00000401179 91 ntBASIC16.18■□□□□ 0.18
TRAV25A0A0B4J276 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV25A0A0B4J276 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.18■□□□□ 0.18
TRAV25A0A0B4J276 TPRG1LP1-201ENST00000598702 760 ntBASIC16.18■□□□□ 0.18
TRAV25A0A0B4J276 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms