Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.66■□□□□ 0.74
TRAV17A0A0B4J275 NCF1B-203ENST00000435988 1254 ntBASIC19.66■□□□□ 0.74
TRAV17A0A0B4J275 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAV17A0A0B4J275 MFSD11-216ENST00000590393 1141 ntBASIC19.66■□□□□ 0.74
TRAV17A0A0B4J275 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV17A0A0B4J275 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV17A0A0B4J275 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.65■□□□□ 0.74
TRAV17A0A0B4J275 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV17A0A0B4J275 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV17A0A0B4J275 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV17A0A0B4J275 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAV17A0A0B4J275 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV17A0A0B4J275 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.65■□□□□ 0.74
TRAV17A0A0B4J275 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.65■□□□□ 0.74
TRAV17A0A0B4J275 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
TRAV17A0A0B4J275 AC055733.4-201ENST00000638462 1354 ntBASIC19.65■□□□□ 0.74
TRAV17A0A0B4J275 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV17A0A0B4J275 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.64■□□□□ 0.74
TRAV17A0A0B4J275 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
TRAV17A0A0B4J275 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.64■□□□□ 0.73
TRAV17A0A0B4J275 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV17A0A0B4J275 GPX1P1-201ENST00000388829 606 ntBASIC19.64■□□□□ 0.73
TRAV17A0A0B4J275 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
TRAV17A0A0B4J275 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV17A0A0B4J275 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV17A0A0B4J275 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.64■□□□□ 0.73
TRAV17A0A0B4J275 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV17A0A0B4J275 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.64■□□□□ 0.73
TRAV17A0A0B4J275 AL034346.1-201ENST00000568244 1277 ntBASIC19.64■□□□□ 0.73
TRAV17A0A0B4J275 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV17A0A0B4J275 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAV17A0A0B4J275 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TRAV17A0A0B4J275 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV17A0A0B4J275 AP001160.3-201ENST00000601484 763 ntBASIC19.64■□□□□ 0.73
TRAV17A0A0B4J275 AC231657.2-201ENST00000624556 255 ntBASIC19.64■□□□□ 0.73
TRAV17A0A0B4J275 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV17A0A0B4J275 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV17A0A0B4J275 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV17A0A0B4J275 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV17A0A0B4J275 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV17A0A0B4J275 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
TRAV17A0A0B4J275 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV17A0A0B4J275 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV17A0A0B4J275 AP004607.7-201ENST00000527152 1677 ntBASIC19.63■□□□□ 0.73
TRAV17A0A0B4J275 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.63■□□□□ 0.73
TRAV17A0A0B4J275 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV17A0A0B4J275 OR7E47P-201ENST00000546390 1422 ntBASIC19.63■□□□□ 0.73
TRAV17A0A0B4J275 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV17A0A0B4J275 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.63■□□□□ 0.73
TRAV17A0A0B4J275 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV17A0A0B4J275 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.63■□□□□ 0.73
TRAV17A0A0B4J275 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV17A0A0B4J275 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.63■□□□□ 0.73
TRAV17A0A0B4J275 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.63■□□□□ 0.73
TRAV17A0A0B4J275 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV17A0A0B4J275 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV17A0A0B4J275 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV17A0A0B4J275 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TRAV17A0A0B4J275 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV17A0A0B4J275 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV17A0A0B4J275 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV17A0A0B4J275 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV17A0A0B4J275 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
TRAV17A0A0B4J275 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV17A0A0B4J275 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV17A0A0B4J275 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV17A0A0B4J275 AL355802.2-201ENST00000402069 882 ntBASIC19.62■□□□□ 0.73
TRAV17A0A0B4J275 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.62■□□□□ 0.73
TRAV17A0A0B4J275 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRAV17A0A0B4J275 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.62■□□□□ 0.73
TRAV17A0A0B4J275 UBE2DNL-204ENST00000602536 740 ntBASIC19.62■□□□□ 0.73
TRAV17A0A0B4J275 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV17A0A0B4J275 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV17A0A0B4J275 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV17A0A0B4J275 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV17A0A0B4J275 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV17A0A0B4J275 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV17A0A0B4J275 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRAV17A0A0B4J275 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRAV17A0A0B4J275 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TRAV17A0A0B4J275 AC007322.1-201ENST00000426983 750 ntBASIC19.61■□□□□ 0.73
TRAV17A0A0B4J275 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAV17A0A0B4J275 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.61■□□□□ 0.73
TRAV17A0A0B4J275 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.61■□□□□ 0.73
TRAV17A0A0B4J275 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV17A0A0B4J275 MYCNOS-205ENST00000641950 531 ntBASIC19.61■□□□□ 0.73
TRAV17A0A0B4J275 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV17A0A0B4J275 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.61■□□□□ 0.73
TRAV17A0A0B4J275 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.61■□□□□ 0.73
TRAV17A0A0B4J275 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV17A0A0B4J275 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV17A0A0B4J275 DUSP8P5-201ENST00000422884 1815 ntBASIC19.6■□□□□ 0.73
TRAV17A0A0B4J275 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV17A0A0B4J275 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV17A0A0B4J275 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV17A0A0B4J275 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV17A0A0B4J275 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV17A0A0B4J275 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.6■□□□□ 0.73
TRAV17A0A0B4J275 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAV17A0A0B4J275 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms