Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV12-3A0A0B4J271 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV12-3A0A0B4J271 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV12-3A0A0B4J271 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRAV12-3A0A0B4J271 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV12-3A0A0B4J271 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV12-3A0A0B4J271 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV12-3A0A0B4J271 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV12-3A0A0B4J271 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV12-3A0A0B4J271 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRAV12-3A0A0B4J271 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV12-3A0A0B4J271 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV12-3A0A0B4J271 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV12-3A0A0B4J271 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV12-3A0A0B4J271 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
TRAV12-3A0A0B4J271 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV12-3A0A0B4J271 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV12-3A0A0B4J271 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRAV12-3A0A0B4J271 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRAV12-3A0A0B4J271 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV12-3A0A0B4J271 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV12-3A0A0B4J271 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV12-3A0A0B4J271 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV12-3A0A0B4J271 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV12-3A0A0B4J271 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.03■□□□□ 0.16
TRAV12-3A0A0B4J271 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV12-3A0A0B4J271 SRD5A1P1-201ENST00000442297 786 ntBASIC16.03■□□□□ 0.16
TRAV12-3A0A0B4J271 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV12-3A0A0B4J271 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV12-3A0A0B4J271 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV12-3A0A0B4J271 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV12-3A0A0B4J271 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV12-3A0A0B4J271 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV12-3A0A0B4J271 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV12-3A0A0B4J271 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV12-3A0A0B4J271 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV12-3A0A0B4J271 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV12-3A0A0B4J271 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV12-3A0A0B4J271 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV12-3A0A0B4J271 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV12-3A0A0B4J271 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV12-3A0A0B4J271 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TRAV12-3A0A0B4J271 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV12-3A0A0B4J271 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV12-3A0A0B4J271 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV12-3A0A0B4J271 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV12-3A0A0B4J271 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV12-3A0A0B4J271 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.02■□□□□ 0.16
TRAV12-3A0A0B4J271 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.02■□□□□ 0.16
TRAV12-3A0A0B4J271 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV12-3A0A0B4J271 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV12-3A0A0B4J271 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV12-3A0A0B4J271 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.02■□□□□ 0.15
TRAV12-3A0A0B4J271 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.02■□□□□ 0.15
TRAV12-3A0A0B4J271 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV12-3A0A0B4J271 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
TRAV12-3A0A0B4J271 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV12-3A0A0B4J271 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
TRAV12-3A0A0B4J271 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV12-3A0A0B4J271 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRAV12-3A0A0B4J271 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.01■□□□□ 0.15
TRAV12-3A0A0B4J271 AL356441.2-201ENST00000443009 864 ntBASIC16.01■□□□□ 0.15
TRAV12-3A0A0B4J271 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV12-3A0A0B4J271 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV12-3A0A0B4J271 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.01■□□□□ 0.15
TRAV12-3A0A0B4J271 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TRAV12-3A0A0B4J271 CA15P2-201ENST00000611168 834 ntBASIC16.01■□□□□ 0.15
TRAV12-3A0A0B4J271 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV12-3A0A0B4J271 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV12-3A0A0B4J271 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV12-3A0A0B4J271 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV12-3A0A0B4J271 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV12-3A0A0B4J271 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRAV12-3A0A0B4J271 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16■□□□□ 0.15
TRAV12-3A0A0B4J271 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TRAV12-3A0A0B4J271 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRAV12-3A0A0B4J271 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV12-3A0A0B4J271 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRAV12-3A0A0B4J271 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16■□□□□ 0.15
TRAV12-3A0A0B4J271 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV12-3A0A0B4J271 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV12-3A0A0B4J271 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16■□□□□ 0.15
TRAV12-3A0A0B4J271 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV12-3A0A0B4J271 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV12-3A0A0B4J271 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV12-3A0A0B4J271 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16■□□□□ 0.15
TRAV12-3A0A0B4J271 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV12-3A0A0B4J271 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV12-3A0A0B4J271 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16■□□□□ 0.15
TRAV12-3A0A0B4J271 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV12-3A0A0B4J271 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
TRAV12-3A0A0B4J271 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRAV12-3A0A0B4J271 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV12-3A0A0B4J271 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV12-3A0A0B4J271 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRAV12-3A0A0B4J271 MIR3181-201ENST00000578512 73 ntBASIC15.99■□□□□ 0.15
TRAV12-3A0A0B4J271 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TRAV12-3A0A0B4J271 AC092171.4-201ENST00000609130 632 ntBASIC15.99■□□□□ 0.15
TRAV12-3A0A0B4J271 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV12-3A0A0B4J271 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms