Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV41A0A0B4J266 AC012414.1-201ENST00000556676 535 ntBASIC17.01■□□□□ 0.31
TRAV41A0A0B4J266 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAV41A0A0B4J266 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAV41A0A0B4J266 AL354811.1-201ENST00000610286 706 ntBASIC17.01■□□□□ 0.31
TRAV41A0A0B4J266 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV41A0A0B4J266 AL358852.1-201ENST00000623174 1268 ntBASIC17.01■□□□□ 0.31
TRAV41A0A0B4J266 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRAV41A0A0B4J266 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV41A0A0B4J266 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV41A0A0B4J266 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAV41A0A0B4J266 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV41A0A0B4J266 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAV41A0A0B4J266 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV41A0A0B4J266 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV41A0A0B4J266 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17■□□□□ 0.31
TRAV41A0A0B4J266 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV41A0A0B4J266 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17■□□□□ 0.31
TRAV41A0A0B4J266 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV41A0A0B4J266 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17■□□□□ 0.31
TRAV41A0A0B4J266 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV41A0A0B4J266 LINC00526-201ENST00000581067 1875 ntBASIC17■□□□□ 0.31
TRAV41A0A0B4J266 SMUG1P1-201ENST00000590640 811 ntBASIC17■□□□□ 0.31
TRAV41A0A0B4J266 GUSBP5-202ENST00000510805 1989 ntBASIC17■□□□□ 0.31
TRAV41A0A0B4J266 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV41A0A0B4J266 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV41A0A0B4J266 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV41A0A0B4J266 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAV41A0A0B4J266 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV41A0A0B4J266 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV41A0A0B4J266 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRAV41A0A0B4J266 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAV41A0A0B4J266 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV41A0A0B4J266 AC080038.3-201ENST00000623346 1952 ntBASIC16.99■□□□□ 0.31
TRAV41A0A0B4J266 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV41A0A0B4J266 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV41A0A0B4J266 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV41A0A0B4J266 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV41A0A0B4J266 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.99■□□□□ 0.31
TRAV41A0A0B4J266 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.99■□□□□ 0.31
TRAV41A0A0B4J266 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV41A0A0B4J266 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV41A0A0B4J266 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.99■□□□□ 0.31
TRAV41A0A0B4J266 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV41A0A0B4J266 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRAV41A0A0B4J266 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV41A0A0B4J266 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
TRAV41A0A0B4J266 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV41A0A0B4J266 PKD1P6-201ENST00000343738 4769 ntBASIC16.98■□□□□ 0.31
TRAV41A0A0B4J266 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV41A0A0B4J266 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
TRAV41A0A0B4J266 TERT-206ENST00000508104 2486 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAV41A0A0B4J266 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV41A0A0B4J266 AC242852.2-201ENST00000615738 1807 ntBASIC16.98■□□□□ 0.31
TRAV41A0A0B4J266 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV41A0A0B4J266 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAV41A0A0B4J266 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAV41A0A0B4J266 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV41A0A0B4J266 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV41A0A0B4J266 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
TRAV41A0A0B4J266 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.98■□□□□ 0.31
TRAV41A0A0B4J266 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV41A0A0B4J266 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRAV41A0A0B4J266 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV41A0A0B4J266 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TRAV41A0A0B4J266 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV41A0A0B4J266 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV41A0A0B4J266 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TRAV41A0A0B4J266 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV41A0A0B4J266 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV41A0A0B4J266 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV41A0A0B4J266 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV41A0A0B4J266 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.97■□□□□ 0.31
TRAV41A0A0B4J266 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV41A0A0B4J266 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV41A0A0B4J266 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV41A0A0B4J266 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.97■□□□□ 0.31
TRAV41A0A0B4J266 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRAV41A0A0B4J266 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV41A0A0B4J266 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV41A0A0B4J266 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV41A0A0B4J266 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV41A0A0B4J266 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV41A0A0B4J266 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
TRAV41A0A0B4J266 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV41A0A0B4J266 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV41A0A0B4J266 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRAV41A0A0B4J266 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV41A0A0B4J266 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRAV41A0A0B4J266 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV41A0A0B4J266 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.96■□□□□ 0.31
TRAV41A0A0B4J266 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV41A0A0B4J266 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV41A0A0B4J266 AL034346.1-201ENST00000568244 1277 ntBASIC16.96■□□□□ 0.31
TRAV41A0A0B4J266 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV41A0A0B4J266 MIR6084-201ENST00000622012 110 ntBASIC16.96■□□□□ 0.31
TRAV41A0A0B4J266 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV41A0A0B4J266 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV41A0A0B4J266 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV41A0A0B4J266 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms