Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV13-1A0A0B4J241 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC15.01□□□□□ -0.01
TRAV13-1A0A0B4J241 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TRAV13-1A0A0B4J241 AC009086.3-201ENST00000623486 1008 ntBASIC15.01□□□□□ -0.01
TRAV13-1A0A0B4J241 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV13-1A0A0B4J241 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV13-1A0A0B4J241 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV13-1A0A0B4J241 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRAV13-1A0A0B4J241 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV13-1A0A0B4J241 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV13-1A0A0B4J241 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV13-1A0A0B4J241 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
TRAV13-1A0A0B4J241 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV13-1A0A0B4J241 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
TRAV13-1A0A0B4J241 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV13-1A0A0B4J241 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 FP325331.1-202ENST00000623531 1380 ntBASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 AC026310.3-201ENST00000625186 2373 ntBASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV13-1A0A0B4J241 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV13-1A0A0B4J241 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV13-1A0A0B4J241 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV13-1A0A0B4J241 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV13-1A0A0B4J241 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV13-1A0A0B4J241 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV13-1A0A0B4J241 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV13-1A0A0B4J241 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV13-1A0A0B4J241 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TRAV13-1A0A0B4J241 AC010542.4-201ENST00000563151 1910 ntBASIC14.99□□□□□ -0.01
TRAV13-1A0A0B4J241 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV13-1A0A0B4J241 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV13-1A0A0B4J241 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRAV13-1A0A0B4J241 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV13-1A0A0B4J241 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV13-1A0A0B4J241 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV13-1A0A0B4J241 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV13-1A0A0B4J241 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TRAV13-1A0A0B4J241 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV13-1A0A0B4J241 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV13-1A0A0B4J241 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV13-1A0A0B4J241 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV13-1A0A0B4J241 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
TRAV13-1A0A0B4J241 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
TRAV13-1A0A0B4J241 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV13-1A0A0B4J241 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV13-1A0A0B4J241 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV13-1A0A0B4J241 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV13-1A0A0B4J241 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV13-1A0A0B4J241 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV13-1A0A0B4J241 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 SENP5-202ENST00000419026 973 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 CLTA-210ENST00000540080 989 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV13-1A0A0B4J241 AL121603.2-201ENST00000557373 2117 ntBASIC14.96□□□□□ -0.01
TRAV13-1A0A0B4J241 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms