Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.43■□□□□ 0.7
TRGV5A0A0B4J1U4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRGV5A0A0B4J1U4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.43■□□□□ 0.7
TRGV5A0A0B4J1U4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.43■□□□□ 0.7
TRGV5A0A0B4J1U4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.43■□□□□ 0.7
TRGV5A0A0B4J1U4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRGV5A0A0B4J1U4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TRGV5A0A0B4J1U4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRGV5A0A0B4J1U4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.43■□□□□ 0.7
TRGV5A0A0B4J1U4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRGV5A0A0B4J1U4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRGV5A0A0B4J1U4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.42■□□□□ 0.7
TRGV5A0A0B4J1U4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRGV5A0A0B4J1U4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.42■□□□□ 0.7
TRGV5A0A0B4J1U4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TRGV5A0A0B4J1U4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRGV5A0A0B4J1U4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRGV5A0A0B4J1U4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRGV5A0A0B4J1U4 AC006015.1-201ENST00000429970 570 ntBASIC19.42■□□□□ 0.7
TRGV5A0A0B4J1U4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.42■□□□□ 0.7
TRGV5A0A0B4J1U4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.42■□□□□ 0.7
TRGV5A0A0B4J1U4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.42■□□□□ 0.7
TRGV5A0A0B4J1U4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.42■□□□□ 0.7
TRGV5A0A0B4J1U4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.42■□□□□ 0.7
TRGV5A0A0B4J1U4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TRGV5A0A0B4J1U4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRGV5A0A0B4J1U4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRGV5A0A0B4J1U4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRGV5A0A0B4J1U4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TRGV5A0A0B4J1U4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TRGV5A0A0B4J1U4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TRGV5A0A0B4J1U4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRGV5A0A0B4J1U4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRGV5A0A0B4J1U4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.41■□□□□ 0.7
TRGV5A0A0B4J1U4 AL034346.1-201ENST00000568244 1277 ntBASIC19.41■□□□□ 0.7
TRGV5A0A0B4J1U4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRGV5A0A0B4J1U4 KRT87P-202ENST00000534226 1464 ntBASIC19.41■□□□□ 0.7
TRGV5A0A0B4J1U4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRGV5A0A0B4J1U4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.4■□□□□ 0.7
TRGV5A0A0B4J1U4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRGV5A0A0B4J1U4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRGV5A0A0B4J1U4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRGV5A0A0B4J1U4 LINC00526-201ENST00000581067 1875 ntBASIC19.4■□□□□ 0.7
TRGV5A0A0B4J1U4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRGV5A0A0B4J1U4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRGV5A0A0B4J1U4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRGV5A0A0B4J1U4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.4■□□□□ 0.7
TRGV5A0A0B4J1U4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.4■□□□□ 0.7
TRGV5A0A0B4J1U4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.4■□□□□ 0.7
TRGV5A0A0B4J1U4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.4■□□□□ 0.7
TRGV5A0A0B4J1U4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.4■□□□□ 0.7
TRGV5A0A0B4J1U4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.4■□□□□ 0.7
TRGV5A0A0B4J1U4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.4■□□□□ 0.7
TRGV5A0A0B4J1U4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRGV5A0A0B4J1U4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRGV5A0A0B4J1U4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRGV5A0A0B4J1U4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRGV5A0A0B4J1U4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.4■□□□□ 0.7
TRGV5A0A0B4J1U4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRGV5A0A0B4J1U4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TRGV5A0A0B4J1U4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRGV5A0A0B4J1U4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRGV5A0A0B4J1U4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.39■□□□□ 0.69
TRGV5A0A0B4J1U4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
TRGV5A0A0B4J1U4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.39■□□□□ 0.69
TRGV5A0A0B4J1U4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRGV5A0A0B4J1U4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TRGV5A0A0B4J1U4 ESRRAP2-201ENST00000418437 1549 ntBASIC19.39■□□□□ 0.69
TRGV5A0A0B4J1U4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRGV5A0A0B4J1U4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TRGV5A0A0B4J1U4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
TRGV5A0A0B4J1U4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRGV5A0A0B4J1U4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRGV5A0A0B4J1U4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRGV5A0A0B4J1U4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRGV5A0A0B4J1U4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRGV5A0A0B4J1U4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRGV5A0A0B4J1U4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.38■□□□□ 0.69
TRGV5A0A0B4J1U4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRGV5A0A0B4J1U4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.38■□□□□ 0.69
TRGV5A0A0B4J1U4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRGV5A0A0B4J1U4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRGV5A0A0B4J1U4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TRGV5A0A0B4J1U4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.38■□□□□ 0.69
TRGV5A0A0B4J1U4 DUSP8P5-201ENST00000422884 1815 ntBASIC19.38■□□□□ 0.69
TRGV5A0A0B4J1U4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRGV5A0A0B4J1U4 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.38■□□□□ 0.69
TRGV5A0A0B4J1U4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRGV5A0A0B4J1U4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.38■□□□□ 0.69
TRGV5A0A0B4J1U4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRGV5A0A0B4J1U4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.38■□□□□ 0.69
TRGV5A0A0B4J1U4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRGV5A0A0B4J1U4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRGV5A0A0B4J1U4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.38■□□□□ 0.69
TRGV5A0A0B4J1U4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRGV5A0A0B4J1U4 AC055733.4-201ENST00000638462 1354 ntBASIC19.38■□□□□ 0.69
TRGV5A0A0B4J1U4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRGV5A0A0B4J1U4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRGV5A0A0B4J1U4 AC087742.1-201ENST00000575880 1738 ntBASIC19.37■□□□□ 0.69
TRGV5A0A0B4J1U4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms