Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC187A0A096LP49 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC187A0A096LP49 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC187A0A096LP49 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC187A0A096LP49 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC187A0A096LP49 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.58■□□□□ 0.89
CCDC187A0A096LP49 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CCDC187A0A096LP49 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC187A0A096LP49 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC187A0A096LP49 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC187A0A096LP49 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC187A0A096LP49 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC187A0A096LP49 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCDC187A0A096LP49 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC187A0A096LP49 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC187A0A096LP49 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC187A0A096LP49 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC187A0A096LP49 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC187A0A096LP49 TSPY20P-201ENST00000450910 630 ntBASIC20.57■□□□□ 0.88
CCDC187A0A096LP49 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC187A0A096LP49 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.57■□□□□ 0.88
CCDC187A0A096LP49 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC187A0A096LP49 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC187A0A096LP49 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.57■□□□□ 0.88
CCDC187A0A096LP49 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC187A0A096LP49 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC187A0A096LP49 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC187A0A096LP49 ABCB10P4-201ENST00000566803 2184 ntBASIC20.56■□□□□ 0.88
CCDC187A0A096LP49 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC187A0A096LP49 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC187A0A096LP49 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC187A0A096LP49 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC187A0A096LP49 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC187A0A096LP49 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC187A0A096LP49 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC187A0A096LP49 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.56■□□□□ 0.88
CCDC187A0A096LP49 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC187A0A096LP49 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC187A0A096LP49 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC187A0A096LP49 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC187A0A096LP49 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCDC187A0A096LP49 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
CCDC187A0A096LP49 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCDC187A0A096LP49 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC187A0A096LP49 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CCDC187A0A096LP49 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
CCDC187A0A096LP49 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC187A0A096LP49 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC187A0A096LP49 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC187A0A096LP49 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CCDC187A0A096LP49 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CCDC187A0A096LP49 AL138781.1-201ENST00000566567 1274 ntBASIC20.55■□□□□ 0.88
CCDC187A0A096LP49 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC187A0A096LP49 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC187A0A096LP49 AC055733.4-201ENST00000638462 1354 ntBASIC20.55■□□□□ 0.88
CCDC187A0A096LP49 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC187A0A096LP49 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC187A0A096LP49 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CCDC187A0A096LP49 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC187A0A096LP49 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CCDC187A0A096LP49 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CCDC187A0A096LP49 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CCDC187A0A096LP49 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC187A0A096LP49 AF201337.1-201ENST00000520239 748 ntBASIC20.54■□□□□ 0.88
CCDC187A0A096LP49 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC187A0A096LP49 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC187A0A096LP49 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC187A0A096LP49 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC187A0A096LP49 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC187A0A096LP49 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC187A0A096LP49 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
CCDC187A0A096LP49 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC187A0A096LP49 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC187A0A096LP49 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC187A0A096LP49 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC187A0A096LP49 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC187A0A096LP49 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC187A0A096LP49 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC187A0A096LP49 AC010141.2-201ENST00000452426 721 ntBASIC20.53■□□□□ 0.88
CCDC187A0A096LP49 KRT18P20-201ENST00000548986 1279 ntBASIC20.53■□□□□ 0.88
CCDC187A0A096LP49 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.53■□□□□ 0.88
CCDC187A0A096LP49 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.53■□□□□ 0.88
CCDC187A0A096LP49 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC187A0A096LP49 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CCDC187A0A096LP49 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC187A0A096LP49 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
CCDC187A0A096LP49 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC187A0A096LP49 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC187A0A096LP49 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC187A0A096LP49 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CCDC187A0A096LP49 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC187A0A096LP49 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
CCDC187A0A096LP49 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC187A0A096LP49 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC187A0A096LP49 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC187A0A096LP49 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC187A0A096LP49 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
CCDC187A0A096LP49 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
CCDC187A0A096LP49 AC079089.2-201ENST00000531211 1277 ntBASIC20.52■□□□□ 0.88
CCDC187A0A096LP49 AC138907.5-202ENST00000569484 235 ntBASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms