Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHGB1Q9Y5G3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHGB1Q9Y5G3 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
PCDHGB1Q9Y5G3 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC24.81■■□□□ 1.56
PCDHGB1Q9Y5G3 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.81■■□□□ 1.56
PCDHGB1Q9Y5G3 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC24.8■■□□□ 1.56
PCDHGB1Q9Y5G3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHGB1Q9Y5G3 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
PCDHGB1Q9Y5G3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHGB1Q9Y5G3 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHGB1Q9Y5G3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
PCDHGB1Q9Y5G3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.76■■□□□ 1.55
PCDHGB1Q9Y5G3 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHGB1Q9Y5G3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHGB1Q9Y5G3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGB1Q9Y5G3 ZNRF2P1-201ENST00000441407 443 ntBASIC24.74■■□□□ 1.55
PCDHGB1Q9Y5G3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHGB1Q9Y5G3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGB1Q9Y5G3 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGB1Q9Y5G3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGB1Q9Y5G3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHGB1Q9Y5G3 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC24.72■■□□□ 1.55
PCDHGB1Q9Y5G3 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC24.71■■□□□ 1.55
PCDHGB1Q9Y5G3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.71■■□□□ 1.55
PCDHGB1Q9Y5G3 AC006077.2-201ENST00000623591 457 ntBASIC24.7■■□□□ 1.54
PCDHGB1Q9Y5G3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHGB1Q9Y5G3 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
PCDHGB1Q9Y5G3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHGB1Q9Y5G3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHGB1Q9Y5G3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHGB1Q9Y5G3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHGB1Q9Y5G3 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC24.67■■□□□ 1.54
PCDHGB1Q9Y5G3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDHGB1Q9Y5G3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.66■■□□□ 1.54
PCDHGB1Q9Y5G3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHGB1Q9Y5G3 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHGB1Q9Y5G3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHGB1Q9Y5G3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHGB1Q9Y5G3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHGB1Q9Y5G3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHGB1Q9Y5G3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGB1Q9Y5G3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGB1Q9Y5G3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHGB1Q9Y5G3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHGB1Q9Y5G3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHGB1Q9Y5G3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHGB1Q9Y5G3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.59■■□□□ 1.53
PCDHGB1Q9Y5G3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHGB1Q9Y5G3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHGB1Q9Y5G3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.58■■□□□ 1.53
PCDHGB1Q9Y5G3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHGB1Q9Y5G3 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHGB1Q9Y5G3 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC24.56■■□□□ 1.52
PCDHGB1Q9Y5G3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHGB1Q9Y5G3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHGB1Q9Y5G3 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC24.55■■□□□ 1.52
PCDHGB1Q9Y5G3 ST7-AS1-201ENST00000456775 1889 ntBASIC24.55■■□□□ 1.52
PCDHGB1Q9Y5G3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHGB1Q9Y5G3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.54■■□□□ 1.52
PCDHGB1Q9Y5G3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.52■■□□□ 1.52
PCDHGB1Q9Y5G3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHGB1Q9Y5G3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.52■■□□□ 1.52
PCDHGB1Q9Y5G3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHGB1Q9Y5G3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.5■■□□□ 1.51
PCDHGB1Q9Y5G3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
PCDHGB1Q9Y5G3 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC24.5■■□□□ 1.51
PCDHGB1Q9Y5G3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.5■■□□□ 1.51
PCDHGB1Q9Y5G3 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHGB1Q9Y5G3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHGB1Q9Y5G3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHGB1Q9Y5G3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.49■■□□□ 1.51
PCDHGB1Q9Y5G3 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHGB1Q9Y5G3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.49■■□□□ 1.51
PCDHGB1Q9Y5G3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHGB1Q9Y5G3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHGB1Q9Y5G3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHGB1Q9Y5G3 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHGB1Q9Y5G3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.48■■□□□ 1.51
PCDHGB1Q9Y5G3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHGB1Q9Y5G3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHGB1Q9Y5G3 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHGB1Q9Y5G3 AC142086.6-201ENST00000621154 1765 ntBASIC24.47■■□□□ 1.51
PCDHGB1Q9Y5G3 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC24.47■■□□□ 1.51
PCDHGB1Q9Y5G3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGB1Q9Y5G3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGB1Q9Y5G3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGB1Q9Y5G3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
PCDHGB1Q9Y5G3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
PCDHGB1Q9Y5G3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
PCDHGB1Q9Y5G3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHGB1Q9Y5G3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHGB1Q9Y5G3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.43■■□□□ 1.5
PCDHGB1Q9Y5G3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHGB1Q9Y5G3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHGB1Q9Y5G3 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHGB1Q9Y5G3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
PCDHGB1Q9Y5G3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PCDHGB1Q9Y5G3 MVK-208ENST00000539696 608 ntTSL 5 BASIC24.39■■□□□ 1.49
PCDHGB1Q9Y5G3 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
PCDHGB1Q9Y5G3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms