Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Clcn4Q61418 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Clcn4Q61418 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Clcn4Q61418 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Clcn4Q61418 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Clcn4Q61418 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Clcn4Q61418 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Clcn4Q61418 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Clcn4Q61418 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Clcn4Q61418 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Clcn4Q61418 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.95■■□□□ 1.26
Clcn4Q61418 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Clcn4Q61418 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Clcn4Q61418 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Clcn4Q61418 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Clcn4Q61418 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Clcn4Q61418 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.9■■□□□ 1.26
Clcn4Q61418 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Clcn4Q61418 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Clcn4Q61418 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Clcn4Q61418 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.9■■□□□ 1.26
Clcn4Q61418 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.89■■□□□ 1.26
Clcn4Q61418 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Clcn4Q61418 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Clcn4Q61418 Gm16148-201ENSMUST00000119653 893 ntBASIC22.88■■□□□ 1.25
Clcn4Q61418 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Clcn4Q61418 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Clcn4Q61418 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Clcn4Q61418 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Clcn4Q61418 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Clcn4Q61418 Peli2-204ENSMUST00000226513 1320 ntBASIC22.84■■□□□ 1.25
Clcn4Q61418 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Clcn4Q61418 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Clcn4Q61418 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Clcn4Q61418 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.84■■□□□ 1.25
Clcn4Q61418 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Clcn4Q61418 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Clcn4Q61418 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Clcn4Q61418 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Clcn4Q61418 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.8■■□□□ 1.24
Clcn4Q61418 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.8■■□□□ 1.24
Clcn4Q61418 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Clcn4Q61418 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Clcn4Q61418 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Clcn4Q61418 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Clcn4Q61418 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Clcn4Q61418 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Clcn4Q61418 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Clcn4Q61418 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Clcn4Q61418 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.75■■□□□ 1.23
Clcn4Q61418 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
Clcn4Q61418 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Clcn4Q61418 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.74■■□□□ 1.23
Clcn4Q61418 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.74■■□□□ 1.23
Clcn4Q61418 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Clcn4Q61418 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Clcn4Q61418 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Clcn4Q61418 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Clcn4Q61418 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Clcn4Q61418 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
Clcn4Q61418 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.7■■□□□ 1.22
Clcn4Q61418 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Clcn4Q61418 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Clcn4Q61418 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.68■■□□□ 1.22
Clcn4Q61418 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Clcn4Q61418 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Clcn4Q61418 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Clcn4Q61418 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.66■■□□□ 1.22
Clcn4Q61418 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Clcn4Q61418 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Clcn4Q61418 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Clcn4Q61418 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Clcn4Q61418 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Clcn4Q61418 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Clcn4Q61418 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Clcn4Q61418 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Clcn4Q61418 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Clcn4Q61418 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Clcn4Q61418 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Clcn4Q61418 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Clcn4Q61418 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
Clcn4Q61418 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Clcn4Q61418 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Clcn4Q61418 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
Clcn4Q61418 Amer2-203ENSMUST00000225247 2662 ntBASIC22.59■■□□□ 1.21
Clcn4Q61418 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Clcn4Q61418 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Clcn4Q61418 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.59■■□□□ 1.21
Clcn4Q61418 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.59■■□□□ 1.21
Clcn4Q61418 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Clcn4Q61418 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Clcn4Q61418 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Clcn4Q61418 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Clcn4Q61418 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Clcn4Q61418 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Clcn4Q61418 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Clcn4Q61418 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Clcn4Q61418 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Clcn4Q61418 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Clcn4Q61418 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms