Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 tS(GCU)LtS(GCU)L 80 nt15.91■□□□□ 0.14
RKR1Q04781 GPN2YOR262W 1044 nt15.89■□□□□ 0.13
RKR1Q04781 TOM6YOR045W 186 nt15.88■□□□□ 0.13
RKR1Q04781 UTH1YKR042W 1098 nt15.87■□□□□ 0.13
RKR1Q04781 CLB6YGR109C 1143 nt15.86■□□□□ 0.13
RKR1Q04781 TSC10YBR265W 963 nt15.84■□□□□ 0.13
RKR1Q04781 TIR3YIL011W 810 nt15.83■□□□□ 0.13
RKR1Q04781 NRT1YOR071C 1797 nt15.8■□□□□ 0.12
RKR1Q04781 MSB4YOL112W 1479 nt15.8■□□□□ 0.12
RKR1Q04781 YJL195CYJL195C 702 nt15.79■□□□□ 0.12
RKR1Q04781 HIP1YGR191W 1812 nt15.77■□□□□ 0.12
RKR1Q04781 ESS1YJR017C 513 nt15.76■□□□□ 0.11
RKR1Q04781 NBP35YGL091C 987 nt15.75■□□□□ 0.11
RKR1Q04781 AQY2YLL052C 450 nt15.75■□□□□ 0.11
RKR1Q04781 PUP1YOR157C 786 nt15.7■□□□□ 0.1
RKR1Q04781 CPD1YGR247W 720 nt15.7■□□□□ 0.1
RKR1Q04781 DUS1YML080W 1272 nt15.68■□□□□ 0.1
RKR1Q04781 SEN2YLR105C 1134 nt15.67■□□□□ 0.1
RKR1Q04781 SWE1YJL187C 2460 nt15.67■□□□□ 0.1
RKR1Q04781 ADH1YOL086C 1047 nt15.66■□□□□ 0.1
RKR1Q04781 ATG15YCR068W 1563 nt15.66■□□□□ 0.1
RKR1Q04781 RIB3YDR487C 627 nt15.65■□□□□ 0.1
RKR1Q04781 POM34YLR018C 900 nt15.65■□□□□ 0.1
RKR1Q04781 TIF6YPR016C 738 nt15.64■□□□□ 0.09
RKR1Q04781 RDN18-1RDN18-1 1800 nt15.63■□□□□ 0.09
RKR1Q04781 RDN18-2RDN18-2 1800 nt15.63■□□□□ 0.09
RKR1Q04781 NAP1YKR048C 1254 nt15.62■□□□□ 0.09
RKR1Q04781 PRO1YDR300C 1287 nt15.61■□□□□ 0.09
RKR1Q04781 LOT5YKL183W 921 nt15.61■□□□□ 0.09
RKR1Q04781 AAC1YMR056C 930 nt15.58■□□□□ 0.08
RKR1Q04781 YEL008WYEL008W 381 nt15.53■□□□□ 0.08
RKR1Q04781 YJR114WYJR114W 393 nt15.53■□□□□ 0.08
RKR1Q04781 ZTA1YBR046C 1005 nt15.53■□□□□ 0.08
RKR1Q04781 MET28YIR017C 564 nt15.52■□□□□ 0.07
RKR1Q04781 YML089CYML089C 369 nt15.51■□□□□ 0.07
RKR1Q04781 YPI1YFR003C 468 nt15.49■□□□□ 0.07
RKR1Q04781 YPL222C-AYPL222C-A 246 nt15.49■□□□□ 0.07
RKR1Q04781 STR3YGL184C 1398 nt15.47■□□□□ 0.07
RKR1Q04781 LSC2YGR244C 1284 nt15.43■□□□□ 0.06
RKR1Q04781 AKR2YOR034C 2250 nt15.41■□□□□ 0.06
RKR1Q04781 YCL074WYCL074W 927 nt15.41■□□□□ 0.06
RKR1Q04781 GND1YHR183W 1470 nt15.4■□□□□ 0.06
RKR1Q04781 FIT3YOR383C 615 nt15.39■□□□□ 0.05
RKR1Q04781 APT2YDR441C 546 nt15.38■□□□□ 0.05
RKR1Q04781 PGC1YPL206C 966 nt15.31■□□□□ 0.04
RKR1Q04781 RIB2YOL066C 1776 nt15.3■□□□□ 0.04
RKR1Q04781 ARP6YLR085C 1317 nt15.29■□□□□ 0.04
RKR1Q04781 GAP1YKR039W 1809 nt15.29■□□□□ 0.04
RKR1Q04781 LSB3YFR024C-A 1380 nt15.28■□□□□ 0.04
RKR1Q04781 PAU5YFL020C 369 nt15.26■□□□□ 0.03
RKR1Q04781 DIF1YLR437C 402 nt15.26■□□□□ 0.03
RKR1Q04781 RTN2YDL204W 1182 nt15.25■□□□□ 0.03
RKR1Q04781 YAR028WYAR028W 705 nt15.24■□□□□ 0.03
RKR1Q04781 SMM1YNR015W 1155 nt15.24■□□□□ 0.03
RKR1Q04781 YJL064WYJL064W 396 nt15.23■□□□□ 0.03
RKR1Q04781 SLG1YOR008C 1137 nt15.22■□□□□ 0.03
RKR1Q04781 PLB1YMR008C 1995 nt15.21■□□□□ 0.03
RKR1Q04781 PAU19YMR325W 375 nt15.2■□□□□ 0.02
RKR1Q04781 YBR232CYBR232C 360 nt15.19■□□□□ 0.02
RKR1Q04781 PRY1YJL079C 900 nt15.19■□□□□ 0.02
RKR1Q04781 UGA4YDL210W 1716 nt15.18■□□□□ 0.02
RKR1Q04781 TIM44YIL022W 1296 nt15.17■□□□□ 0.02
RKR1Q04781 YJL055WYJL055W 738 nt15.16■□□□□ 0.02
RKR1Q04781 MTG2YHR168W 1557 nt15.11■□□□□ 0.01
RKR1Q04781 ALD4YOR374W 1560 nt15.09■□□□□ 0.01
RKR1Q04781 UTR1YJR049C 1593 nt15.09■□□□□ 0.01
RKR1Q04781 FCY21YER060W 1587 nt15.08■□□□□ 0
RKR1Q04781 FUR4YBR021W 1902 nt15.07■□□□□ 0
RKR1Q04781 ALP1YNL270C 1722 nt15.07■□□□□ 0
RKR1Q04781 ERG6YML008C 1152 nt15.07■□□□□ 0
RKR1Q04781 HXT12YIL170W 1374 nt15.02■□□□□ -0
RKR1Q04781 RIB1YBL033C 1038 nt15.01□□□□□ -0.01
RKR1Q04781 TIP1YBR067C 633 nt15□□□□□ -0.01
RKR1Q04781 VRG4YGL225W 1014 nt14.99□□□□□ -0.01
RKR1Q04781 SED1YDR077W 1017 nt14.94□□□□□ -0.02
RKR1Q04781 YER190C-AYER190C-A 576 nt14.92□□□□□ -0.02
RKR1Q04781 YGR296C-AYGR296C-A 576 nt14.92□□□□□ -0.02
RKR1Q04781 YML133W-AYML133W-A 576 nt14.92□□□□□ -0.02
RKR1Q04781 YNL339W-AYNL339W-A 576 nt14.92□□□□□ -0.02
RKR1Q04781 YPL283W-AYPL283W-A 576 nt14.92□□□□□ -0.02
RKR1Q04781 PRM5YIL117C 957 nt14.91□□□□□ -0.02
RKR1Q04781 SOD2YHR008C 702 nt14.9□□□□□ -0.02
RKR1Q04781 STP3YLR375W 1032 nt14.9□□□□□ -0.02
RKR1Q04781 THI72YOR192C 1800 nt14.89□□□□□ -0.03
RKR1Q04781 BMT6YLR063W 1098 nt14.87□□□□□ -0.03
RKR1Q04781 MEP3YPR138C 1470 nt14.87□□□□□ -0.03
RKR1Q04781 HSP60YLR259C 1719 nt14.87□□□□□ -0.03
RKR1Q04781 CCT5YJR064W 1689 nt14.86□□□□□ -0.03
RKR1Q04781 YGR259CYGR259C 441 nt14.85□□□□□ -0.03
RKR1Q04781 YPL251WYPL251W 303 nt14.85□□□□□ -0.03
RKR1Q04781 YKR005CYKR005C 1578 nt14.84□□□□□ -0.03
RKR1Q04781 QDR2YIL121W 1629 nt14.84□□□□□ -0.03
RKR1Q04781 YJL118WYJL118W 660 nt14.82□□□□□ -0.04
RKR1Q04781 POP2YNR052C 1302 nt14.81□□□□□ -0.04
RKR1Q04781 YIA6YIL006W 1122 nt14.75□□□□□ -0.05
RKR1Q04781 LIP1YMR298W 453 nt14.73□□□□□ -0.05
RKR1Q04781 SAM35YHR083W 990 nt14.73□□□□□ -0.05
RKR1Q04781 GAL3YDR009W 1563 nt14.71□□□□□ -0.05
RKR1Q04781 SNZ1YMR096W 894 nt14.71□□□□□ -0.05
RKR1Q04781 LSB5YCL034W 1065 nt14.69□□□□□ -0.06
Retrieved 100 of 7,029 protein–RNA pairs in 6.8 ms