Protein–RNA interactions for Protein: P49957

TRM9, tRNA (carboxymethyluridine(34)-5-O)-methyltransferase, yeastyeast

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRM9P49957 STR3YGL184C 1398 nt9.3□□□□□ -0.92
TRM9P49957 RAD23YEL037C 1197 nt9.3□□□□□ -0.92
TRM9P49957 POM34YLR018C 900 nt9.3□□□□□ -0.92
TRM9P49957 YML089CYML089C 369 nt9.3□□□□□ -0.92
TRM9P49957 ALG12YNR030W 1656 nt9.29□□□□□ -0.92
TRM9P49957 HIP1YGR191W 1812 nt9.28□□□□□ -0.92
TRM9P49957 DUS1YML080W 1272 nt9.26□□□□□ -0.93
TRM9P49957 TOM6YOR045W 186 nt9.26□□□□□ -0.93
TRM9P49957 YCL074WYCL074W 927 nt9.25□□□□□ -0.93
TRM9P49957 TSC10YBR265W 963 nt9.25□□□□□ -0.93
TRM9P49957 RDN18-1RDN18-1 1800 nt9.24□□□□□ -0.93
TRM9P49957 RDN18-2RDN18-2 1800 nt9.24□□□□□ -0.93
TRM9P49957 YLR437C-AYLR437C-A 228 nt9.24□□□□□ -0.93
TRM9P49957 SDH5YOL071W 489 nt9.24□□□□□ -0.93
TRM9P49957 MET28YIR017C 564 nt9.21□□□□□ -0.94
TRM9P49957 PEX2YJL210W 816 nt9.21□□□□□ -0.94
TRM9P49957 TIF6YPR016C 738 nt9.21□□□□□ -0.94
TRM9P49957 ARP6YLR085C 1317 nt9.21□□□□□ -0.94
TRM9P49957 NRT1YOR071C 1797 nt9.21□□□□□ -0.94
TRM9P49957 PRO1YDR300C 1287 nt9.2□□□□□ -0.94
TRM9P49957 RIB3YDR487C 627 nt9.2□□□□□ -0.94
TRM9P49957 YGR012WYGR012W 1182 nt9.2□□□□□ -0.94
TRM9P49957 AQY2YLL052C 450 nt9.2□□□□□ -0.94
TRM9P49957 CAB5YDR196C 726 nt9.16□□□□□ -0.94
TRM9P49957 ATG15YCR068W 1563 nt9.16□□□□□ -0.94
TRM9P49957 FIT3YOR383C 615 nt9.15□□□□□ -0.94
TRM9P49957 YLR279WYLR279W 390 nt9.14□□□□□ -0.95
TRM9P49957 RTN2YDL204W 1182 nt9.12□□□□□ -0.95
TRM9P49957 GAP1YKR039W 1809 nt9.1□□□□□ -0.95
TRM9P49957 HSP60YLR259C 1719 nt9.09□□□□□ -0.95
TRM9P49957 FUR4YBR021W 1902 nt9.09□□□□□ -0.95
TRM9P49957 MSB4YOL112W 1479 nt9.08□□□□□ -0.96
TRM9P49957 RAD51YER095W 1203 nt9.06□□□□□ -0.96
TRM9P49957 PLB1YMR008C 1995 nt9.04□□□□□ -0.96
TRM9P49957 FUN14YAL008W 597 nt9.04□□□□□ -0.96
TRM9P49957 YPL222C-AYPL222C-A 246 nt9.04□□□□□ -0.96
TRM9P49957 YLR349WYLR349W 507 nt9.03□□□□□ -0.96
TRM9P49957 STE4YOR212W 1272 nt9.03□□□□□ -0.96
TRM9P49957 YPI1YFR003C 468 nt9.01□□□□□ -0.97
TRM9P49957 YAR028WYAR028W 705 nt9□□□□□ -0.97
TRM9P49957 DIF1YLR437C 402 nt9□□□□□ -0.97
TRM9P49957 ADH1YOL086C 1047 nt9□□□□□ -0.97
TRM9P49957 YJL195CYJL195C 702 nt8.99□□□□□ -0.97
TRM9P49957 ALP1YNL270C 1722 nt8.99□□□□□ -0.97
TRM9P49957 GND1YHR183W 1470 nt8.98□□□□□ -0.97
TRM9P49957 NAR1YNL240C 1476 nt8.98□□□□□ -0.97
TRM9P49957 RPM1RPM1 483 nt8.97□□□□□ -0.97
TRM9P49957 YNR029CYNR029C 1290 nt8.95□□□□□ -0.98
TRM9P49957 MTG2YHR168W 1557 nt8.95□□□□□ -0.98
TRM9P49957 YKR005CYKR005C 1578 nt8.95□□□□□ -0.98
TRM9P49957 YGR259CYGR259C 441 nt8.94□□□□□ -0.98
TRM9P49957 LOT5YKL183W 921 nt8.93□□□□□ -0.98
TRM9P49957 UTR1YJR049C 1593 nt8.93□□□□□ -0.98
TRM9P49957 FCY21YER060W 1587 nt8.91□□□□□ -0.98
TRM9P49957 ZTA1YBR046C 1005 nt8.91□□□□□ -0.98
TRM9P49957 YEL008WYEL008W 381 nt8.89□□□□□ -0.99
TRM9P49957 AKR2YOR034C 2250 nt8.89□□□□□ -0.99
TRM9P49957 HSL7YBR133C 2484 nt8.88□□□□□ -0.99
TRM9P49957 ADH7YCR105W 1086 nt8.87□□□□□ -0.99
TRM9P49957 APT2YDR441C 546 nt8.87□□□□□ -0.99
TRM9P49957 AAC1YMR056C 930 nt8.85□□□□□ -0.99
TRM9P49957 PRP4YPR178W 1398 nt8.85□□□□□ -0.99
TRM9P49957 SMM1YNR015W 1155 nt8.84□□□□□ -0.99
TRM9P49957 CMP2YML057W 1815 nt8.84□□□□□ -0.99
TRM9P49957 SAM35YHR083W 990 nt8.83□□□□□ -1
TRM9P49957 PAU15YIR041W 375 nt8.83□□□□□ -1
TRM9P49957 HXT12YIL170W 1374 nt8.82□□□□□ -1
TRM9P49957 SED1YDR077W 1017 nt8.81□□□□□ -1
TRM9P49957 LSB3YFR024C-A 1380 nt8.81□□□□□ -1
TRM9P49957 BMT6YLR063W 1098 nt8.8□□□□□ -1
TRM9P49957 DPS1YLL018C 1674 nt8.8□□□□□ -1
TRM9P49957 CPD1YGR247W 720 nt8.79□□□□□ -1
TRM9P49957 IRC24YIR036C 792 nt8.79□□□□□ -1
TRM9P49957 RDN25-1RDN25-1 3396 nt8.77□□□□□ -1.01
TRM9P49957 RDN25-2RDN25-2 3396 nt8.77□□□□□ -1.01
TRM9P49957 PRM5YIL117C 957 nt8.76□□□□□ -1.01
TRM9P49957 ESS1YJR017C 513 nt8.76□□□□□ -1.01
TRM9P49957 PRY1YJL079C 900 nt8.75□□□□□ -1.01
TRM9P49957 GPN2YOR262W 1044 nt8.75□□□□□ -1.01
TRM9P49957 DBP1YPL119C 1854 nt8.74□□□□□ -1.01
TRM9P49957 UGA4YDL210W 1716 nt8.74□□□□□ -1.01
TRM9P49957 RIB2YOL066C 1776 nt8.74□□□□□ -1.01
TRM9P49957 HEL2YDR266C 1920 nt8.74□□□□□ -1.01
TRM9P49957 YER190C-AYER190C-A 576 nt8.73□□□□□ -1.01
TRM9P49957 YGR296C-AYGR296C-A 576 nt8.73□□□□□ -1.01
TRM9P49957 YML133W-AYML133W-A 576 nt8.73□□□□□ -1.01
TRM9P49957 LIP1YMR298W 453 nt8.73□□□□□ -1.01
TRM9P49957 YNL339W-AYNL339W-A 576 nt8.73□□□□□ -1.01
TRM9P49957 YPL283W-AYPL283W-A 576 nt8.73□□□□□ -1.01
TRM9P49957 CYT2YKL087C 675 nt8.7□□□□□ -1.02
TRM9P49957 LEU9YOR108W 1815 nt8.69□□□□□ -1.02
TRM9P49957 VRG4YGL225W 1014 nt8.68□□□□□ -1.02
TRM9P49957 YPL251WYPL251W 303 nt8.68□□□□□ -1.02
TRM9P49957 tS(GCU)LtS(GCU)L 80 nt8.67□□□□□ -1.02
TRM9P49957 PBP1YGR178C 2169 nt8.66□□□□□ -1.02
TRM9P49957 ALD4YOR374W 1560 nt8.66□□□□□ -1.02
TRM9P49957 YBL086CYBL086C 1401 nt8.66□□□□□ -1.02
TRM9P49957 HXT1YHR094C 1713 nt8.65□□□□□ -1.03
TRM9P49957 CCT5YJR064W 1689 nt8.65□□□□□ -1.03
TRM9P49957 SNF1YDR477W 1902 nt8.64□□□□□ -1.03
Retrieved 100 of 7,029 protein–RNA pairs in 11.3 ms