Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmx3P42581 Mipep-204ENSMUST00000225043 1548 ntBASIC20.63■□□□□ 0.89
Hmx3P42581 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmx3P42581 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.62■□□□□ 0.89
Hmx3P42581 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.62■□□□□ 0.89
Hmx3P42581 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmx3P42581 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmx3P42581 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Hmx3P42581 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmx3P42581 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hmx3P42581 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hmx3P42581 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Hmx3P42581 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmx3P42581 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.57■□□□□ 0.88
Hmx3P42581 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Hmx3P42581 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmx3P42581 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmx3P42581 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.56■□□□□ 0.88
Hmx3P42581 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Hmx3P42581 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hmx3P42581 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Hmx3P42581 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmx3P42581 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.55■□□□□ 0.88
Hmx3P42581 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.54■□□□□ 0.88
Hmx3P42581 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Hmx3P42581 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.54■□□□□ 0.88
Hmx3P42581 Gm27322-201ENSMUST00000184007 104 ntBASIC20.53■□□□□ 0.88
Hmx3P42581 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Hmx3P42581 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmx3P42581 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmx3P42581 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmx3P42581 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmx3P42581 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmx3P42581 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmx3P42581 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmx3P42581 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmx3P42581 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.47■□□□□ 0.87
Hmx3P42581 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
Hmx3P42581 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmx3P42581 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmx3P42581 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.44■□□□□ 0.86
Hmx3P42581 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmx3P42581 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmx3P42581 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Hmx3P42581 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.41■□□□□ 0.86
Hmx3P42581 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmx3P42581 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Hmx3P42581 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hmx3P42581 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hmx3P42581 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmx3P42581 Gm26115-201ENSMUST00000175605 87 ntBASIC20.38■□□□□ 0.85
Hmx3P42581 Gm8109-201ENSMUST00000194076 746 ntBASIC20.37■□□□□ 0.85
Hmx3P42581 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hmx3P42581 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmx3P42581 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hmx3P42581 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hmx3P42581 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.34■□□□□ 0.85
Hmx3P42581 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hmx3P42581 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Hmx3P42581 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmx3P42581 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Hmx3P42581 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hmx3P42581 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hmx3P42581 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hmx3P42581 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hmx3P42581 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hmx3P42581 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmx3P42581 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmx3P42581 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.3■□□□□ 0.84
Hmx3P42581 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmx3P42581 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Hmx3P42581 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hmx3P42581 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmx3P42581 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmx3P42581 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmx3P42581 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmx3P42581 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hmx3P42581 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hmx3P42581 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmx3P42581 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Hmx3P42581 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.25■□□□□ 0.83
Hmx3P42581 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hmx3P42581 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmx3P42581 Amer2-203ENSMUST00000225247 2662 ntBASIC20.24■□□□□ 0.83
Hmx3P42581 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.24■□□□□ 0.83
Hmx3P42581 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmx3P42581 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmx3P42581 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmx3P42581 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmx3P42581 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmx3P42581 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmx3P42581 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmx3P42581 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Hmx3P42581 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hmx3P42581 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmx3P42581 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmx3P42581 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hmx3P42581 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.18■□□□□ 0.82
Hmx3P42581 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Hmx3P42581 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms