Protein–RNA interactions for Protein: P38959

VPS41, Vacuolar protein sorting-associated protein 41, yeastyeast

Predictions only

Length 992 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS41P38959 GAP1YKR039W 1809 nt10.28□□□□□ -0.76
VPS41P38959 SAM35YHR083W 990 nt10.27□□□□□ -0.77
VPS41P38959 SGT2YOR007C 1041 nt10.27□□□□□ -0.77
VPS41P38959 MET2YNL277W 1461 nt10.27□□□□□ -0.77
VPS41P38959 SFP1YLR403W 2052 nt10.24□□□□□ -0.77
VPS41P38959 UGP1YKL035W 1500 nt10.23□□□□□ -0.77
VPS41P38959 COQ8YGL119W 1506 nt10.21□□□□□ -0.78
VPS41P38959 DBP1YPL119C 1854 nt10.21□□□□□ -0.78
VPS41P38959 LSC2YGR244C 1284 nt10.2□□□□□ -0.78
VPS41P38959 YIL100C-AYIL100C-A 339 nt10.2□□□□□ -0.78
VPS41P38959 BSP1YPR171W 1731 nt10.19□□□□□ -0.78
VPS41P38959 YSP3YOR003W 1437 nt10.19□□□□□ -0.78
VPS41P38959 HIS2YFR025C 1008 nt10.19□□□□□ -0.78
VPS41P38959 SHY1YGR112W 1170 nt10.18□□□□□ -0.78
VPS41P38959 HUA1YGR268C 597 nt10.18□□□□□ -0.78
VPS41P38959 SHH4YLR164W 507 nt10.18□□□□□ -0.78
VPS41P38959 tL(GAG)GtL(GAG)G 82 nt10.17□□□□□ -0.78
VPS41P38959 TIR3YIL011W 810 nt10.17□□□□□ -0.78
VPS41P38959 HXT1YHR094C 1713 nt10.16□□□□□ -0.78
VPS41P38959 PRO1YDR300C 1287 nt10.16□□□□□ -0.78
VPS41P38959 MRPL8YJL063C 717 nt10.15□□□□□ -0.78
VPS41P38959 ARO8YGL202W 1503 nt10.15□□□□□ -0.78
VPS41P38959 OPI10YOL032W 741 nt10.12□□□□□ -0.79
VPS41P38959 ADO1YJR105W 1023 nt10.1□□□□□ -0.79
VPS41P38959 GID7YCL039W 2238 nt10.1□□□□□ -0.79
VPS41P38959 DIF1YLR437C 402 nt10.09□□□□□ -0.79
VPS41P38959 KES1YPL145C 1305 nt10.08□□□□□ -0.8
VPS41P38959 POM34YLR018C 900 nt10.08□□□□□ -0.8
VPS41P38959 CCT2YIL142W 1584 nt10.08□□□□□ -0.8
VPS41P38959 SGA1YIL099W 1650 nt10.08□□□□□ -0.8
VPS41P38959 HMG2YLR450W 3138 nt10.07□□□□□ -0.8
VPS41P38959 TPO4YOR273C 1980 nt10.06□□□□□ -0.8
VPS41P38959 BET2YPR176C 978 nt10.06□□□□□ -0.8
VPS41P38959 UGA4YDL210W 1716 nt10.06□□□□□ -0.8
VPS41P38959 ATG15YCR068W 1563 nt10.05□□□□□ -0.8
VPS41P38959 YHL008CYHL008C 1884 nt10.05□□□□□ -0.8
VPS41P38959 PSD1YNL169C 1503 nt10.05□□□□□ -0.8
VPS41P38959 LSB6YJL100W 1824 nt10.04□□□□□ -0.8
VPS41P38959 CWC15YDR163W 528 nt10.03□□□□□ -0.8
VPS41P38959 MRP20YDR405W 792 nt10.03□□□□□ -0.8
VPS41P38959 YBL086CYBL086C 1401 nt10.03□□□□□ -0.8
VPS41P38959 RET2YFR051C 1641 nt10.03□□□□□ -0.8
VPS41P38959 NPP1YCR026C 2229 nt10.01□□□□□ -0.81
VPS41P38959 ZAP1YJL056C 2643 nt10.01□□□□□ -0.81
VPS41P38959 RSC8YFR037C 1674 nt10□□□□□ -0.81
VPS41P38959 YNL115CYNL115C 1935 nt10□□□□□ -0.81
VPS41P38959 URA6YKL024C 615 nt10□□□□□ -0.81
VPS41P38959 UFO1YML088W 2007 nt9.97□□□□□ -0.81
VPS41P38959 YER190C-AYER190C-A 576 nt9.96□□□□□ -0.82
VPS41P38959 YGR296C-AYGR296C-A 576 nt9.96□□□□□ -0.82
VPS41P38959 YML133W-AYML133W-A 576 nt9.96□□□□□ -0.82
VPS41P38959 YNL339W-AYNL339W-A 576 nt9.96□□□□□ -0.82
VPS41P38959 YPL283W-AYPL283W-A 576 nt9.96□□□□□ -0.82
VPS41P38959 DMA2YNL116W 1569 nt9.96□□□□□ -0.82
VPS41P38959 YML089CYML089C 369 nt9.95□□□□□ -0.82
VPS41P38959 LIP1YMR298W 453 nt9.95□□□□□ -0.82
VPS41P38959 ZTA1YBR046C 1005 nt9.95□□□□□ -0.82
VPS41P38959 CYT1YOR065W 930 nt9.93□□□□□ -0.82
VPS41P38959 PEX25YPL112C 1185 nt9.93□□□□□ -0.82
VPS41P38959 ESBP6YNL125C 2022 nt9.92□□□□□ -0.82
VPS41P38959 TOM6YOR045W 186 nt9.91□□□□□ -0.82
VPS41P38959 VPS75YNL246W 795 nt9.9□□□□□ -0.82
VPS41P38959 UBX6YJL048C 1191 nt9.89□□□□□ -0.83
VPS41P38959 ACH1YBL015W 1581 nt9.88□□□□□ -0.83
VPS41P38959 SFA1YDL168W 1161 nt9.88□□□□□ -0.83
VPS41P38959 YHR218WYHR218W 1812 nt9.87□□□□□ -0.83
VPS41P38959 LEU9YOR108W 1815 nt9.87□□□□□ -0.83
VPS41P38959 SED1YDR077W 1017 nt9.87□□□□□ -0.83
VPS41P38959 YFL066CYFL066C 1179 nt9.87□□□□□ -0.83
VPS41P38959 ODC1YPL134C 933 nt9.87□□□□□ -0.83
VPS41P38959 OYE3YPL171C 1203 nt9.87□□□□□ -0.83
VPS41P38959 YHL019W-AYHL019W-A 594 nt9.86□□□□□ -0.83
VPS41P38959 QDR2YIL121W 1629 nt9.85□□□□□ -0.83
VPS41P38959 PET8YNL003C 855 nt9.85□□□□□ -0.83
VPS41P38959 YFR018CYFR018C 1092 nt9.84□□□□□ -0.83
VPS41P38959 TIF6YPR016C 738 nt9.84□□□□□ -0.83
VPS41P38959 FMS1YMR020W 1527 nt9.83□□□□□ -0.84
VPS41P38959 YAR028WYAR028W 705 nt9.83□□□□□ -0.84
VPS41P38959 SAM1YLR180W 1149 nt9.83□□□□□ -0.84
VPS41P38959 TOA2YKL058W 369 nt9.82□□□□□ -0.84
VPS41P38959 SPP2YOR148C 558 nt9.82□□□□□ -0.84
VPS41P38959 YPL251WYPL251W 303 nt9.82□□□□□ -0.84
VPS41P38959 GID8YMR135C 1368 nt9.81□□□□□ -0.84
VPS41P38959 BRR1YPR057W 1026 nt9.81□□□□□ -0.84
VPS41P38959 RFC1YOR217W 2586 nt9.8□□□□□ -0.84
VPS41P38959 SSL2YIL143C 2532 nt9.8□□□□□ -0.84
VPS41P38959 URA8YJR103W 1737 nt9.8□□□□□ -0.84
VPS41P38959 YDR010CYDR010C 333 nt9.8□□□□□ -0.84
VPS41P38959 PRE6YOL038W 765 nt9.8□□□□□ -0.84
VPS41P38959 MTG2YHR168W 1557 nt9.8□□□□□ -0.84
VPS41P38959 MRS6YOR370C 1812 nt9.79□□□□□ -0.84
VPS41P38959 HXK1YFR053C 1458 nt9.79□□□□□ -0.84
VPS41P38959 GND2YGR256W 1479 nt9.79□□□□□ -0.84
VPS41P38959 PEX2YJL210W 816 nt9.78□□□□□ -0.84
VPS41P38959 ALD5YER073W 1563 nt9.78□□□□□ -0.84
VPS41P38959 DIG1YPL049C 1359 nt9.75□□□□□ -0.85
VPS41P38959 FLR1YBR008C 1647 nt9.74□□□□□ -0.85
VPS41P38959 TRT2tT(CGU)K 72 nt9.74□□□□□ -0.85
VPS41P38959 YKL133CYKL133C 1392 nt9.74□□□□□ -0.85
VPS41P38959 VPS62YGR141W 1404 nt9.73□□□□□ -0.85
Retrieved 100 of 7,029 protein–RNA pairs in 16.1 ms