Protein–RNA interactions for Protein: P38789

SSF1, Ribosome biogenesis protein SSF1, yeastyeast

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSF1P38789 LSC2YGR244C 1284 nt11.99□□□□□ -0.49
SSF1P38789 POM34YLR018C 900 nt11.99□□□□□ -0.49
SSF1P38789 PRO1YDR300C 1287 nt11.98□□□□□ -0.49
SSF1P38789 RTN2YDL204W 1182 nt11.97□□□□□ -0.49
SSF1P38789 PEX2YJL210W 816 nt11.96□□□□□ -0.49
SSF1P38789 YML089CYML089C 369 nt11.96□□□□□ -0.49
SSF1P38789 ATG15YCR068W 1563 nt11.94□□□□□ -0.5
SSF1P38789 HSP60YLR259C 1719 nt11.94□□□□□ -0.5
SSF1P38789 YKR005CYKR005C 1578 nt11.93□□□□□ -0.5
SSF1P38789 ARP6YLR085C 1317 nt11.93□□□□□ -0.5
SSF1P38789 UTH1YKR042W 1098 nt11.93□□□□□ -0.5
SSF1P38789 MET8YBR213W 825 nt11.93□□□□□ -0.5
SSF1P38789 YGR259CYGR259C 441 nt11.92□□□□□ -0.5
SSF1P38789 SDH5YOL071W 489 nt11.91□□□□□ -0.5
SSF1P38789 PRP4YPR178W 1398 nt11.91□□□□□ -0.5
SSF1P38789 RPS14BYJL191W 417 nt11.9□□□□□ -0.5
SSF1P38789 HIP1YGR191W 1812 nt11.9□□□□□ -0.5
SSF1P38789 RBG2YGR173W 1107 nt11.89□□□□□ -0.51
SSF1P38789 NRT1YOR071C 1797 nt11.87□□□□□ -0.51
SSF1P38789 PLB1YMR008C 1995 nt11.87□□□□□ -0.51
SSF1P38789 YLR111WYLR111W 333 nt11.87□□□□□ -0.51
SSF1P38789 GAP1YKR039W 1809 nt11.87□□□□□ -0.51
SSF1P38789 BMT6YLR063W 1098 nt11.86□□□□□ -0.51
SSF1P38789 YMR226CYMR226C 804 nt11.86□□□□□ -0.51
SSF1P38789 BOR1YNL275W 1731 nt11.84□□□□□ -0.51
SSF1P38789 TIF6YPR016C 738 nt11.84□□□□□ -0.51
SSF1P38789 MET28YIR017C 564 nt11.83□□□□□ -0.52
SSF1P38789 DPS1YLL018C 1674 nt11.81□□□□□ -0.52
SSF1P38789 TSC10YBR265W 963 nt11.79□□□□□ -0.52
SSF1P38789 Q0010Q0010 387 nt11.77□□□□□ -0.53
SSF1P38789 RAD23YEL037C 1197 nt11.74□□□□□ -0.53
SSF1P38789 YGR012WYGR012W 1182 nt11.73□□□□□ -0.53
SSF1P38789 FIT3YOR383C 615 nt11.72□□□□□ -0.53
SSF1P38789 UTR1YJR049C 1593 nt11.71□□□□□ -0.54
SSF1P38789 IRC24YIR036C 792 nt11.68□□□□□ -0.54
SSF1P38789 YJR154WYJR154W 1041 nt11.68□□□□□ -0.54
SSF1P38789 AAC1YMR056C 930 nt11.68□□□□□ -0.54
SSF1P38789 DIF1YLR437C 402 nt11.67□□□□□ -0.54
SSF1P38789 RDN37-1RDN37-1 5354 nt11.66□□□□□ -0.54
SSF1P38789 RDN37-2RDN37-2 5354 nt11.66□□□□□ -0.54
SSF1P38789 YLR279WYLR279W 390 nt11.66□□□□□ -0.54
SSF1P38789 SAM35YHR083W 990 nt11.65□□□□□ -0.54
SSF1P38789 CSM2YIL132C 642 nt11.64□□□□□ -0.55
SSF1P38789 YAR028WYAR028W 705 nt11.64□□□□□ -0.55
SSF1P38789 BSP1YPR171W 1731 nt11.61□□□□□ -0.55
SSF1P38789 PRM5YIL117C 957 nt11.61□□□□□ -0.55
SSF1P38789 MSB4YOL112W 1479 nt11.6□□□□□ -0.55
SSF1P38789 RIB3YDR487C 627 nt11.6□□□□□ -0.55
SSF1P38789 AKR2YOR034C 2250 nt11.58□□□□□ -0.55
SSF1P38789 ALP1YNL270C 1722 nt11.58□□□□□ -0.56
SSF1P38789 YLR437C-AYLR437C-A 228 nt11.58□□□□□ -0.56
SSF1P38789 YPL222C-AYPL222C-A 246 nt11.58□□□□□ -0.56
SSF1P38789 CAB5YDR196C 726 nt11.57□□□□□ -0.56
SSF1P38789 SNF1YDR477W 1902 nt11.56□□□□□ -0.56
SSF1P38789 SSN3YPL042C 1668 nt11.56□□□□□ -0.56
SSF1P38789 SAM1YLR180W 1149 nt11.56□□□□□ -0.56
SSF1P38789 ZTA1YBR046C 1005 nt11.56□□□□□ -0.56
SSF1P38789 MTG2YHR168W 1557 nt11.55□□□□□ -0.56
SSF1P38789 SED1YDR077W 1017 nt11.48□□□□□ -0.57
SSF1P38789 ALD4YOR374W 1560 nt11.48□□□□□ -0.57
SSF1P38789 YER190C-AYER190C-A 576 nt11.47□□□□□ -0.57
SSF1P38789 YGR296C-AYGR296C-A 576 nt11.47□□□□□ -0.57
SSF1P38789 YML133W-AYML133W-A 576 nt11.47□□□□□ -0.57
SSF1P38789 YNL339W-AYNL339W-A 576 nt11.47□□□□□ -0.57
SSF1P38789 YPL283W-AYPL283W-A 576 nt11.47□□□□□ -0.57
SSF1P38789 LIP1YMR298W 453 nt11.44□□□□□ -0.58
SSF1P38789 LOT5YKL183W 921 nt11.43□□□□□ -0.58
SSF1P38789 GND1YHR183W 1470 nt11.42□□□□□ -0.58
SSF1P38789 HIF1YLL022C 1158 nt11.41□□□□□ -0.58
SSF1P38789 HXT1YHR094C 1713 nt11.4□□□□□ -0.58
SSF1P38789 BIO5YNR056C 1686 nt11.4□□□□□ -0.59
SSF1P38789 YPI1YFR003C 468 nt11.37□□□□□ -0.59
SSF1P38789 DBP1YPL119C 1854 nt11.36□□□□□ -0.59
SSF1P38789 SMM1YNR015W 1155 nt11.36□□□□□ -0.59
SSF1P38789 ALG12YNR030W 1656 nt11.36□□□□□ -0.59
SSF1P38789 FCY21YER060W 1587 nt11.34□□□□□ -0.59
SSF1P38789 APT2YDR441C 546 nt11.33□□□□□ -0.6
SSF1P38789 YBL086CYBL086C 1401 nt11.32□□□□□ -0.6
SSF1P38789 TOA2YKL058W 369 nt11.31□□□□□ -0.6
SSF1P38789 UGA4YDL210W 1716 nt11.31□□□□□ -0.6
SSF1P38789 YDR510C-AYDR510C-A 117 nt11.3□□□□□ -0.6
SSF1P38789 YJL195CYJL195C 702 nt11.3□□□□□ -0.6
SSF1P38789 ADH1YOL086C 1047 nt11.3□□□□□ -0.6
SSF1P38789 YPL251WYPL251W 303 nt11.3□□□□□ -0.6
SSF1P38789 BRR1YPR057W 1026 nt11.3□□□□□ -0.6
SSF1P38789 MEP3YPR138C 1470 nt11.29□□□□□ -0.6
SSF1P38789 LSB3YFR024C-A 1380 nt11.28□□□□□ -0.6
SSF1P38789 PRY1YJL079C 900 nt11.27□□□□□ -0.61
SSF1P38789 YMR103CYMR103C 363 nt11.27□□□□□ -0.61
SSF1P38789 PAB1YER165W 1734 nt11.26□□□□□ -0.61
SSF1P38789 FUN14YAL008W 597 nt11.25□□□□□ -0.61
SSF1P38789 YNR029CYNR029C 1290 nt11.25□□□□□ -0.61
SSF1P38789 LEU9YOR108W 1815 nt11.25□□□□□ -0.61
SSF1P38789 UME6YDR207C 2511 nt11.24□□□□□ -0.61
SSF1P38789 STE4YOR212W 1272 nt11.23□□□□□ -0.61
SSF1P38789 SHY1YGR112W 1170 nt11.22□□□□□ -0.61
SSF1P38789 GND2YGR256W 1479 nt11.2□□□□□ -0.62
SSF1P38789 RIB2YOL066C 1776 nt11.2□□□□□ -0.62
SSF1P38789 VRG4YGL225W 1014 nt11.19□□□□□ -0.62
SSF1P38789 ZRT3YKL175W 1512 nt11.18□□□□□ -0.62
Retrieved 100 of 7,029 protein–RNA pairs in 17.4 ms