Protein–RNA interactions for Protein: P25808

SPB4, ATP-dependent rRNA helicase SPB4, yeastyeast

Predicted RBP Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPB4P25808 KDX1YKL161C 1302 nt12.02□□□□□ -0.49
SPB4P25808 GLR1YPL091W 1452 nt12.02□□□□□ -0.49
SPB4P25808 YGL034CYGL034C 366 nt12.01□□□□□ -0.49
SPB4P25808 RSC4YKR008W 1878 nt12□□□□□ -0.49
SPB4P25808 SHM2YLR058C 1410 nt11.98□□□□□ -0.49
SPB4P25808 UBA4YHR111W 1323 nt11.98□□□□□ -0.49
SPB4P25808 TIM17YJL143W 477 nt11.98□□□□□ -0.49
SPB4P25808 REC114YMR133W 1287 nt11.97□□□□□ -0.49
SPB4P25808 XDJ1YLR090W 1380 nt11.96□□□□□ -0.49
SPB4P25808 SEM1YDR363W-A 270 nt11.96□□□□□ -0.49
SPB4P25808 SHB17YKR043C 816 nt11.94□□□□□ -0.5
SPB4P25808 YSR3YKR053C 1215 nt11.94□□□□□ -0.5
SPB4P25808 MIC12YBR262C 321 nt11.94□□□□□ -0.5
SPB4P25808 BNA2YJR078W 1362 nt11.93□□□□□ -0.5
SPB4P25808 NDI1YML120C 1542 nt11.93□□□□□ -0.5
SPB4P25808 RAX1YOR301W 1308 nt11.9□□□□□ -0.5
SPB4P25808 RBG1YAL036C 1110 nt11.9□□□□□ -0.5
SPB4P25808 XYL2YLR070C 1071 nt11.9□□□□□ -0.5
SPB4P25808 NIT1YIL164C 600 nt11.89□□□□□ -0.51
SPB4P25808 FUR4YBR021W 1902 nt11.88□□□□□ -0.51
SPB4P25808 SGT2YOR007C 1041 nt11.88□□□□□ -0.51
SPB4P25808 RBG2YGR173W 1107 nt11.87□□□□□ -0.51
SPB4P25808 GDH3YAL062W 1374 nt11.86□□□□□ -0.51
SPB4P25808 YDR010CYDR010C 333 nt11.83□□□□□ -0.52
SPB4P25808 HHO1YPL127C 777 nt11.82□□□□□ -0.52
SPB4P25808 PHO89YBR296C 1725 nt11.79□□□□□ -0.52
SPB4P25808 SKG1YKR100C 1068 nt11.78□□□□□ -0.52
SPB4P25808 DUT1YBR252W 444 nt11.78□□□□□ -0.52
SPB4P25808 AGP1YCL025C 1902 nt11.76□□□□□ -0.53
SPB4P25808 NAR1YNL240C 1476 nt11.76□□□□□ -0.53
SPB4P25808 YGR201CYGR201C 678 nt11.75□□□□□ -0.53
SPB4P25808 AVT6YER119C 1347 nt11.75□□□□□ -0.53
SPB4P25808 AST1YBL069W 1290 nt11.74□□□□□ -0.53
SPB4P25808 CCA1YER168C 1641 nt11.74□□□□□ -0.53
SPB4P25808 PRP4YPR178W 1398 nt11.73□□□□□ -0.53
SPB4P25808 RET2YFR051C 1641 nt11.72□□□□□ -0.53
SPB4P25808 YCR087WYCR087W 516 nt11.72□□□□□ -0.53
SPB4P25808 AAC1YMR056C 930 nt11.72□□□□□ -0.53
SPB4P25808 HOS2YGL194C 1359 nt11.71□□□□□ -0.53
SPB4P25808 AIM45YPR004C 1035 nt11.71□□□□□ -0.53
SPB4P25808 DPS1YLL018C 1674 nt11.7□□□□□ -0.54
SPB4P25808 PBP1YGR178C 2169 nt11.69□□□□□ -0.54
SPB4P25808 snR78snR78 87 nt11.68□□□□□ -0.54
SPB4P25808 YDR509WYDR509W 348 nt11.67□□□□□ -0.54
SPB4P25808 MAS1YLR163C 1389 nt11.67□□□□□ -0.54
SPB4P25808 YMR226CYMR226C 804 nt11.66□□□□□ -0.54
SPB4P25808 BIO5YNR056C 1686 nt11.65□□□□□ -0.54
SPB4P25808 MRP20YDR405W 792 nt11.65□□□□□ -0.54
SPB4P25808 YJL107CYJL107C 1164 nt11.65□□□□□ -0.54
SPB4P25808 YNR068CYNR068C 819 nt11.64□□□□□ -0.55
SPB4P25808 SNF1YDR477W 1902 nt11.63□□□□□ -0.55
SPB4P25808 GOR1YNL274C 1053 nt11.63□□□□□ -0.55
SPB4P25808 THP3YPR045C 1413 nt11.62□□□□□ -0.55
SPB4P25808 Q0144Q0144 330 nt11.62□□□□□ -0.55
SPB4P25808 YJL211CYJL211C 444 nt11.61□□□□□ -0.55
SPB4P25808 SWP1YMR149W 861 nt11.61□□□□□ -0.55
SPB4P25808 EEB1YPL095C 1371 nt11.6□□□□□ -0.55
SPB4P25808 COQ2YNR041C 1119 nt11.6□□□□□ -0.55
SPB4P25808 PET20YPL159C 762 nt11.6□□□□□ -0.55
SPB4P25808 YGL118CYGL118C 438 nt11.59□□□□□ -0.55
SPB4P25808 SFA1YDL168W 1161 nt11.58□□□□□ -0.56
SPB4P25808 RMA1YKL132C 1293 nt11.57□□□□□ -0.56
SPB4P25808 SAM1YLR180W 1149 nt11.57□□□□□ -0.56
SPB4P25808 HSL7YBR133C 2484 nt11.56□□□□□ -0.56
SPB4P25808 CYT2YKL087C 675 nt11.55□□□□□ -0.56
SPB4P25808 YLR111WYLR111W 333 nt11.55□□□□□ -0.56
SPB4P25808 YNL165WYNL165W 1221 nt11.55□□□□□ -0.56
SPB4P25808 YCR102CYCR102C 1107 nt11.54□□□□□ -0.56
SPB4P25808 COX16YJL003W 357 nt11.54□□□□□ -0.56
SPB4P25808 RSM23YGL129C 1353 nt11.54□□□□□ -0.56
SPB4P25808 SHH4YLR164W 507 nt11.53□□□□□ -0.56
SPB4P25808 YKR005CYKR005C 1578 nt11.53□□□□□ -0.56
SPB4P25808 YHL019W-AYHL019W-A 594 nt11.52□□□□□ -0.57
SPB4P25808 YMR147WYMR147W 672 nt11.52□□□□□ -0.57
SPB4P25808 NAT5YOR253W 531 nt11.52□□□□□ -0.57
SPB4P25808 BSP1YPR171W 1731 nt11.49□□□□□ -0.57
SPB4P25808 DUS1YML080W 1272 nt11.49□□□□□ -0.57
SPB4P25808 SCO2YBR024W 906 nt11.48□□□□□ -0.57
SPB4P25808 APM1YPL259C 1428 nt11.47□□□□□ -0.57
SPB4P25808 BMT6YLR063W 1098 nt11.47□□□□□ -0.57
SPB4P25808 URE2YNL229C 1065 nt11.47□□□□□ -0.57
SPB4P25808 RDN25-1RDN25-1 3396 nt11.47□□□□□ -0.57
SPB4P25808 RDN25-2RDN25-2 3396 nt11.47□□□□□ -0.57
SPB4P25808 YDR306CYDR306C 1437 nt11.46□□□□□ -0.57
SPB4P25808 NBP35YGL091C 987 nt11.46□□□□□ -0.57
SPB4P25808 SDH5YOL071W 489 nt11.46□□□□□ -0.57
SPB4P25808 PIC2YER053C 903 nt11.45□□□□□ -0.58
SPB4P25808 IDP3YNL009W 1263 nt11.44□□□□□ -0.58
SPB4P25808 RDN18-1RDN18-1 1800 nt11.44□□□□□ -0.58
SPB4P25808 RDN18-2RDN18-2 1800 nt11.44□□□□□ -0.58
SPB4P25808 STR3YGL184C 1398 nt11.43□□□□□ -0.58
SPB4P25808 RPL4BYDR012W 1089 nt11.43□□□□□ -0.58
SPB4P25808 RPL4AYBR031W 1089 nt11.43□□□□□ -0.58
SPB4P25808 AQY2YLL052C 450 nt11.42□□□□□ -0.58
SPB4P25808 PZF1YPR186C 1290 nt11.41□□□□□ -0.58
SPB4P25808 ICE2YIL090W 1476 nt11.4□□□□□ -0.58
SPB4P25808 RAD51YER095W 1203 nt11.4□□□□□ -0.58
SPB4P25808 YCR099CYCR099C 468 nt11.39□□□□□ -0.59
SPB4P25808 YEL074WYEL074W 339 nt11.39□□□□□ -0.59
SPB4P25808 TOM6YOR045W 186 nt11.39□□□□□ -0.59
Retrieved 100 of 7,029 protein–RNA pairs in 7 ms