Protein–RNA interactions for Protein: P25441

RPC53, DNA-directed RNA polymerase III subunit RPC4, yeast

Predictions only

Length 422 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	P25441	TIR3	YIL011W	810 nt		10.99	□□□□□ -0.65
RPC53	P25441	COQ2	YNR041C	1119 nt		10.98	□□□□□ -0.65
RPC53	P25441	IRC24	YIR036C	792 nt		10.96	□□□□□ -0.65
RPC53	P25441	YMR244W	YMR244W	1068 nt		10.96	□□□□□ -0.65
RPC53	P25441	ALG12	YNR030W	1656 nt		10.95	□□□□□ -0.66
RPC53	P25441	SNF1	YDR477W	1902 nt		10.94	□□□□□ -0.66
RPC53	P25441	ARP6	YLR085C	1317 nt		10.94	□□□□□ -0.66
RPC53	P25441	SHH4	YLR164W	507 nt		10.93	□□□□□ -0.66
RPC53	P25441	PLB1	YMR008C	1995 nt		10.92	□□□□□ -0.66
RPC53	P25441	RPL4B	YDR012W	1089 nt		10.9	□□□□□ -0.66
RPC53	P25441	RPL4A	YBR031W	1089 nt		10.9	□□□□□ -0.66
RPC53	P25441	LSC2	YGR244C	1284 nt		10.89	□□□□□ -0.67
RPC53	P25441	CLB6	YGR109C	1143 nt		10.88	□□□□□ -0.67
RPC53	P25441	YML089C	YML089C	369 nt		10.87	□□□□□ -0.67
RPC53	P25441	PRO1	YDR300C	1287 nt		10.85	□□□□□ -0.67
RPC53	P25441	POM34	YLR018C	900 nt		10.85	□□□□□ -0.67
RPC53	P25441	TOM6	YOR045W	186 nt		10.84	□□□□□ -0.67
RPC53	P25441	BIO5	YNR056C	1686 nt		10.83	□□□□□ -0.68
RPC53	P25441	UTH1	YKR042W	1098 nt		10.83	□□□□□ -0.68
RPC53	P25441	GAP1	YKR039W	1809 nt		10.81	□□□□□ -0.68
RPC53	P25441	ATG15	YCR068W	1563 nt		10.81	□□□□□ -0.68
RPC53	P25441	HIP1	YGR191W	1812 nt		10.8	□□□□□ -0.68
RPC53	P25441	RBG2	YGR173W	1107 nt		10.8	□□□□□ -0.68
RPC53	P25441	RPS14B	YJL191W	417 nt		10.8	□□□□□ -0.68
RPC53	P25441	PEX2	YJL210W	816 nt		10.8	□□□□□ -0.68
RPC53	P25441	YMR226C	YMR226C	804 nt		10.79	□□□□□ -0.68
RPC53	P25441	SDH5	YOL071W	489 nt		10.77	□□□□□ -0.69
RPC53	P25441	YLR111W	YLR111W	333 nt		10.76	□□□□□ -0.69
RPC53	P25441	UTR1	YJR049C	1593 nt		10.75	□□□□□ -0.69
RPC53	P25441	NRT1	YOR071C	1797 nt		10.75	□□□□□ -0.69
RPC53	P25441	MCH5	YOR306C	1566 nt		10.73	□□□□□ -0.69
RPC53	P25441	PRM5	YIL117C	957 nt		10.73	□□□□□ -0.69
RPC53	P25441	MET28	YIR017C	564 nt		10.73	□□□□□ -0.69
RPC53	P25441	TIF6	YPR016C	738 nt		10.73	□□□□□ -0.69
RPC53	P25441	TSC10	YBR265W	963 nt		10.71	□□□□□ -0.69
RPC53	P25441	RAD23	YEL037C	1197 nt		10.67	□□□□□ -0.7
RPC53	P25441	SAM35	YHR083W	990 nt		10.66	□□□□□ -0.7
RPC53	P25441	FIT3	YOR383C	615 nt		10.66	□□□□□ -0.7
RPC53	P25441	NAR1	YNL240C	1476 nt		10.66	□□□□□ -0.7
RPC53	P25441	PBP1	YGR178C	2169 nt		10.65	□□□□□ -0.71
RPC53	P25441	ALD4	YOR374W	1560 nt		10.65	□□□□□ -0.71
RPC53	P25441	YGR012W	YGR012W	1182 nt		10.64	□□□□□ -0.71
RPC53	P25441	DIF1	YLR437C	402 nt		10.64	□□□□□ -0.71
RPC53	P25441	HIF1	YLL022C	1158 nt		10.62	□□□□□ -0.71
RPC53	P25441	RPM1	RPM1	483 nt		10.61	□□□□□ -0.71
RPC53	P25441	CYT2	YKL087C	675 nt		10.59	□□□□□ -0.71
RPC53	P25441	YAR028W	YAR028W	705 nt		10.57	□□□□□ -0.72
RPC53	P25441	YLR279W	YLR279W	390 nt		10.57	□□□□□ -0.72
RPC53	P25441	RIB3	YDR487C	627 nt		10.53	□□□□□ -0.72
RPC53	P25441	SAM1	YLR180W	1149 nt		10.52	□□□□□ -0.73
RPC53	P25441	YLR437C-A	YLR437C-A	228 nt		10.52	□□□□□ -0.73
RPC53	P25441	MSB4	YOL112W	1479 nt		10.51	□□□□□ -0.73
RPC53	P25441	ALP1	YNL270C	1722 nt		10.5	□□□□□ -0.73
RPC53	P25441	MTG2	YHR168W	1557 nt		10.48	□□□□□ -0.73
RPC53	P25441	AKR2	YOR034C	2250 nt		10.48	□□□□□ -0.73
RPC53	P25441	DBP1	YPL119C	1854 nt		10.47	□□□□□ -0.73
RPC53	P25441	YPL222C-A	YPL222C-A	246 nt		10.47	□□□□□ -0.73
RPC53	P25441	CAB5	YDR196C	726 nt		10.46	□□□□□ -0.73
RPC53	P25441	HXT1	YHR094C	1713 nt		10.46	□□□□□ -0.74
RPC53	P25441	ZTA1	YBR046C	1005 nt		10.45	□□□□□ -0.74
RPC53	P25441	SED1	YDR077W	1017 nt		10.44	□□□□□ -0.74
RPC53	P25441	YER190C-A	YER190C-A	576 nt		10.44	□□□□□ -0.74
RPC53	P25441	YGR296C-A	YGR296C-A	576 nt		10.44	□□□□□ -0.74
RPC53	P25441	YML133W-A	YML133W-A	576 nt		10.44	□□□□□ -0.74
RPC53	P25441	YNL339W-A	YNL339W-A	576 nt		10.44	□□□□□ -0.74
RPC53	P25441	YPL283W-A	YPL283W-A	576 nt		10.44	□□□□□ -0.74
RPC53	P25441	LIP1	YMR298W	453 nt		10.43	□□□□□ -0.74
RPC53	P25441	FRE6	YLL051C	2139 nt		10.43	□□□□□ -0.74
RPC53	P25441	ZRT3	YKL175W	1512 nt		10.4	□□□□□ -0.74
RPC53	P25441	YBL086C	YBL086C	1401 nt		10.37	□□□□□ -0.75
RPC53	P25441	GND1	YHR183W	1470 nt		10.36	□□□□□ -0.75
RPC53	P25441	YAT1	YAR035W	2064 nt		10.35	□□□□□ -0.75
RPC53	P25441	LOT5	YKL183W	921 nt		10.35	□□□□□ -0.75
RPC53	P25441	SHY1	YGR112W	1170 nt		10.34	□□□□□ -0.75
RPC53	P25441	YPI1	YFR003C	468 nt		10.33	□□□□□ -0.76
RPC53	P25441	FCY21	YER060W	1587 nt		10.31	□□□□□ -0.76
RPC53	P25441	LEU9	YOR108W	1815 nt		10.3	□□□□□ -0.76
RPC53	P25441	YPL251W	YPL251W	303 nt		10.3	□□□□□ -0.76
RPC53	P25441	APT2	YDR441C	546 nt		10.29	□□□□□ -0.76
RPC53	P25441	BRR1	YPR057W	1026 nt		10.29	□□□□□ -0.76
RPC53	P25441	TOA2	YKL058W	369 nt		10.28	□□□□□ -0.76
RPC53	P25441	YJL067W	YJL067W	351 nt		10.27	□□□□□ -0.77
RPC53	P25441	SMM1	YNR015W	1155 nt		10.27	□□□□□ -0.77
RPC53	P25441	INA1	YLR413W	2028 nt		10.25	□□□□□ -0.77
RPC53	P25441	ADH1	YOL086C	1047 nt		10.25	□□□□□ -0.77
RPC53	P25441	YJL195C	YJL195C	702 nt		10.24	□□□□□ -0.77
RPC53	P25441	URA6	YKL024C	615 nt		10.24	□□□□□ -0.77
RPC53	P25441	UFO1	YML088W	2007 nt		10.24	□□□□□ -0.77
RPC53	P25441	UGA4	YDL210W	1716 nt		10.23	□□□□□ -0.77
RPC53	P25441	LSB3	YFR024C-A	1380 nt		10.23	□□□□□ -0.77
RPC53	P25441	MEP3	YPR138C	1470 nt		10.23	□□□□□ -0.77
RPC53	P25441	YMR103C	YMR103C	363 nt		10.22	□□□□□ -0.77
RPC53	P25441	FUN14	YAL008W	597 nt		10.21	□□□□□ -0.77
RPC53	P25441	PRY1	YJL079C	900 nt		10.21	□□□□□ -0.77
RPC53	P25441	GND2	YGR256W	1479 nt		10.21	□□□□□ -0.78
RPC53	P25441	YNR029C	YNR029C	1290 nt		10.2	□□□□□ -0.78
RPC53	P25441	RPC82	YPR190C	1965 nt		10.19	□□□□□ -0.78
RPC53	P25441	TRT2	tT(CGU)K	72 nt		10.19	□□□□□ -0.78
RPC53	P25441	STE4	YOR212W	1272 nt		10.19	□□□□□ -0.78
RPC53	P25441	OYE3	YPL171C	1203 nt		10.18	□□□□□ -0.78

Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms