Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 INA1YLR413W 2028 nt10.43□□□□□ -0.74
RAD3P06839 GLR1YPL091W 1452 nt10.42□□□□□ -0.74
RAD3P06839 AQY2YLL052C 450 nt10.4□□□□□ -0.74
RAD3P06839 SHB17YKR043C 816 nt10.39□□□□□ -0.75
RAD3P06839 MUP1YGR055W 1725 nt10.38□□□□□ -0.75
RAD3P06839 AVT6YER119C 1347 nt10.38□□□□□ -0.75
RAD3P06839 SHM2YLR058C 1410 nt10.38□□□□□ -0.75
RAD3P06839 RTN2YDL204W 1182 nt10.36□□□□□ -0.75
RAD3P06839 GOR1YNL274C 1053 nt10.36□□□□□ -0.75
RAD3P06839 YSR3YKR053C 1215 nt10.35□□□□□ -0.75
RAD3P06839 YDR010CYDR010C 333 nt10.34□□□□□ -0.75
RAD3P06839 GDH3YAL062W 1374 nt10.34□□□□□ -0.75
RAD3P06839 RBG2YGR173W 1107 nt10.32□□□□□ -0.76
RAD3P06839 NIT1YIL164C 600 nt10.32□□□□□ -0.76
RAD3P06839 YCR087WYCR087W 516 nt10.31□□□□□ -0.76
RAD3P06839 NPP1YCR026C 2229 nt10.3□□□□□ -0.76
RAD3P06839 SGT2YOR007C 1041 nt10.3□□□□□ -0.76
RAD3P06839 RET2YFR051C 1641 nt10.29□□□□□ -0.76
RAD3P06839 ACO2YJL200C 2370 nt10.28□□□□□ -0.76
RAD3P06839 XYL2YLR070C 1071 nt10.27□□□□□ -0.77
RAD3P06839 RBG1YAL036C 1110 nt10.24□□□□□ -0.77
RAD3P06839 TPO4YOR273C 1980 nt10.23□□□□□ -0.77
RAD3P06839 YMR226CYMR226C 804 nt10.23□□□□□ -0.77
RAD3P06839 AIM45YPR004C 1035 nt10.23□□□□□ -0.77
RAD3P06839 UGA4YDL210W 1716 nt10.21□□□□□ -0.77
RAD3P06839 PHO89YBR296C 1725 nt10.21□□□□□ -0.77
RAD3P06839 HMG2YLR450W 3138 nt10.2□□□□□ -0.78
RAD3P06839 PLB1YMR008C 1995 nt10.19□□□□□ -0.78
RAD3P06839 HOL1YNR055C 1761 nt10.16□□□□□ -0.78
RAD3P06839 HIF1YLL022C 1158 nt10.16□□□□□ -0.78
RAD3P06839 NBP35YGL091C 987 nt10.14□□□□□ -0.79
RAD3P06839 PRM5YIL117C 957 nt10.14□□□□□ -0.79
RAD3P06839 ARP6YLR085C 1317 nt10.12□□□□□ -0.79
RAD3P06839 MRP20YDR405W 792 nt10.12□□□□□ -0.79
RAD3P06839 YMR209CYMR209C 1374 nt10.11□□□□□ -0.79
RAD3P06839 COQ2YNR041C 1119 nt10.1□□□□□ -0.79
RAD3P06839 SAM1YLR180W 1149 nt10.09□□□□□ -0.79
RAD3P06839 ALD4YOR374W 1560 nt10.09□□□□□ -0.79
RAD3P06839 YCR102CYCR102C 1107 nt10.08□□□□□ -0.8
RAD3P06839 SFA1YDL168W 1161 nt10.06□□□□□ -0.8
RAD3P06839 GID7YCL039W 2238 nt10.06□□□□□ -0.8
RAD3P06839 RPL4BYDR012W 1089 nt10.03□□□□□ -0.8
RAD3P06839 RPL4AYBR031W 1089 nt10.03□□□□□ -0.8
RAD3P06839 URA8YJR103W 1737 nt10.02□□□□□ -0.8
RAD3P06839 UTR1YJR049C 1593 nt10.01□□□□□ -0.81
RAD3P06839 YLR111WYLR111W 333 nt10□□□□□ -0.81
RAD3P06839 YHL008CYHL008C 1884 nt9.98□□□□□ -0.81
RAD3P06839 YHL019W-AYHL019W-A 594 nt9.97□□□□□ -0.81
RAD3P06839 CLB6YGR109C 1143 nt9.96□□□□□ -0.82
RAD3P06839 RPS14BYJL191W 417 nt9.96□□□□□ -0.82
RAD3P06839 RAD23YEL037C 1197 nt9.95□□□□□ -0.82
RAD3P06839 TIR3YIL011W 810 nt9.95□□□□□ -0.82
RAD3P06839 YNL024CYNL024C 741 nt9.94□□□□□ -0.82
RAD3P06839 GAP1YKR039W 1809 nt9.93□□□□□ -0.82
RAD3P06839 SHH4YLR164W 507 nt9.92□□□□□ -0.82
RAD3P06839 UTH1YKR042W 1098 nt9.91□□□□□ -0.82
RAD3P06839 YLR437C-AYLR437C-A 228 nt9.9□□□□□ -0.82
RAD3P06839 ZRT3YKL175W 1512 nt9.9□□□□□ -0.82
RAD3P06839 PSD1YNL169C 1503 nt9.89□□□□□ -0.83
RAD3P06839 LSC2YGR244C 1284 nt9.89□□□□□ -0.83
RAD3P06839 HIS2YFR025C 1008 nt9.88□□□□□ -0.83
RAD3P06839 PRO1YDR300C 1287 nt9.87□□□□□ -0.83
RAD3P06839 SAM35YHR083W 990 nt9.87□□□□□ -0.83
RAD3P06839 SSN3YPL042C 1668 nt9.87□□□□□ -0.83
RAD3P06839 YML089CYML089C 369 nt9.86□□□□□ -0.83
RAD3P06839 SDH5YOL071W 489 nt9.86□□□□□ -0.83
RAD3P06839 TSC10YBR265W 963 nt9.86□□□□□ -0.83
RAD3P06839 HXK1YFR053C 1458 nt9.85□□□□□ -0.83
RAD3P06839 HIP1YGR191W 1812 nt9.85□□□□□ -0.83
RAD3P06839 POM34YLR018C 900 nt9.85□□□□□ -0.83
RAD3P06839 RIB3YDR487C 627 nt9.84□□□□□ -0.83
RAD3P06839 YJL067WYJL067W 351 nt9.84□□□□□ -0.83
RAD3P06839 UGP1YKL035W 1500 nt9.83□□□□□ -0.84
RAD3P06839 RAD51YER095W 1203 nt9.82□□□□□ -0.84
RAD3P06839 TOM6YOR045W 186 nt9.82□□□□□ -0.84
RAD3P06839 ILV3YJR016C 1758 nt9.82□□□□□ -0.84
RAD3P06839 ALD5YER073W 1563 nt9.81□□□□□ -0.84
RAD3P06839 YGR012WYGR012W 1182 nt9.81□□□□□ -0.84
RAD3P06839 NRT1YOR071C 1797 nt9.79□□□□□ -0.84
RAD3P06839 CAB5YDR196C 726 nt9.79□□□□□ -0.84
RAD3P06839 CYT1YOR065W 930 nt9.79□□□□□ -0.84
RAD3P06839 MET28YIR017C 564 nt9.78□□□□□ -0.84
RAD3P06839 YOR325WYOR325W 474 nt9.78□□□□□ -0.84
RAD3P06839 ATG15YCR068W 1563 nt9.78□□□□□ -0.84
RAD3P06839 DBP1YPL119C 1854 nt9.78□□□□□ -0.84
RAD3P06839 COQ8YGL119W 1506 nt9.77□□□□□ -0.84
RAD3P06839 PEX2YJL210W 816 nt9.77□□□□□ -0.85
RAD3P06839 TIF6YPR016C 738 nt9.77□□□□□ -0.85
RAD3P06839 THI72YOR192C 1800 nt9.77□□□□□ -0.85
RAD3P06839 YLR349WYLR349W 507 nt9.76□□□□□ -0.85
RAD3P06839 DIF1YLR437C 402 nt9.76□□□□□ -0.85
RAD3P06839 STE4YOR212W 1272 nt9.75□□□□□ -0.85
RAD3P06839 HXT1YHR094C 1713 nt9.74□□□□□ -0.85
RAD3P06839 YLR279WYLR279W 390 nt9.74□□□□□ -0.85
RAD3P06839 FUN14YAL008W 597 nt9.73□□□□□ -0.85
RAD3P06839 FIT3YOR383C 615 nt9.72□□□□□ -0.85
RAD3P06839 GTB1YDR221W 2109 nt9.71□□□□□ -0.85
RAD3P06839 SHY1YGR112W 1170 nt9.71□□□□□ -0.86
RAD3P06839 YNR029CYNR029C 1290 nt9.7□□□□□ -0.86
RAD3P06839 YJL195CYJL195C 702 nt9.68□□□□□ -0.86
Retrieved 100 of 7,029 protein–RNA pairs in 115.3 ms