Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC015911.7-201ENST00000587542 958 ntBASIC12.83□□□□□ -0.36
SLC1A1P43005 AC016582.2-202ENST00000587765 1094 ntBASIC12.83□□□□□ -0.36
SLC1A1P43005 AD000091.1-201ENST00000592379 287 ntBASIC12.83□□□□□ -0.36
SLC1A1P43005 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC12.83□□□□□ -0.36
SLC1A1P43005 SNX1-214ENST00000625244 324 ntTSL 5 BASIC12.83□□□□□ -0.36
SLC1A1P43005 LINC00339-213ENST00000642137 222 ntBASIC12.83□□□□□ -0.36
SLC1A1P43005 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC1A1P43005 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SLC1A1P43005 AC114811.2-201ENST00000569927 5647 ntBASIC12.83□□□□□ -0.36
SLC1A1P43005 SLC39A13-204ENST00000524928 3553 ntTSL 2 BASIC12.83□□□□□ -0.36
SLC1A1P43005 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC12.83□□□□□ -0.36
SLC1A1P43005 JAML-201ENST00000292067 1959 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
SLC1A1P43005 PRICKLE1-209ENST00000552240 3311 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SLC1A1P43005 VPS45-211ENST00000535106 2695 ntTSL 5 BASIC12.83□□□□□ -0.36
SLC1A1P43005 AL021877.1-201ENST00000457251 2194 ntBASIC12.83□□□□□ -0.36
SLC1A1P43005 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SLC1A1P43005 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SLC1A1P43005 AC026797.1-201ENST00000624837 2869 ntBASIC12.83□□□□□ -0.36
SLC1A1P43005 RBM24-201ENST00000318204 2394 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SLC1A1P43005 FN1-206ENST00000359671 8524 ntTSL 5 BASIC12.82□□□□□ -0.36
SLC1A1P43005 ZFP1-203ENST00000464850 3067 ntTSL 2 BASIC12.82□□□□□ -0.36
SLC1A1P43005 SDE2-201ENST00000272091 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC1A1P43005 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC1A1P43005 ZFAT-202ENST00000429442 4421 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SLC1A1P43005 GPATCH2L-209ENST00000556663 2112 ntTSL 2 BASIC12.82□□□□□ -0.36
SLC1A1P43005 HSD3B1-204ENST00000528909 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC1A1P43005 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC1A1P43005 ZSCAN2-204ENST00000358472 3231 ntTSL 2 BASIC12.82□□□□□ -0.36
SLC1A1P43005 VIL1-202ENST00000392114 1968 ntTSL 2 BASIC12.82□□□□□ -0.36
SLC1A1P43005 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
SLC1A1P43005 BTBD10-201ENST00000278174 2504 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC1A1P43005 TAF1A-203ENST00000366890 1648 ntTSL 2 BASIC12.82□□□□□ -0.36
SLC1A1P43005 SMARCAL1-201ENST00000357276 3271 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
SLC1A1P43005 GRID1-201ENST00000327946 5834 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SLC1A1P43005 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC1A1P43005 RPL17-C18orf32-201ENST00000332968 948 ntTSL 5 BASIC12.82□□□□□ -0.36
SLC1A1P43005 SNCG-202ENST00000372017 701 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC1A1P43005 TRAV38-2DV8-201ENST00000390465 395 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SLC1A1P43005 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC12.82□□□□□ -0.36
SLC1A1P43005 KCNE1-205ENST00000416357 796 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC1A1P43005 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SLC1A1P43005 ATP6AP2-202ENST00000423649 1093 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
SLC1A1P43005 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SLC1A1P43005 AL663070.1-201ENST00000438210 725 ntBASIC12.82□□□□□ -0.36
SLC1A1P43005 BX571846.1-201ENST00000447347 553 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SLC1A1P43005 AC112492.3-201ENST00000457557 1031 ntBASIC12.82□□□□□ -0.36
SLC1A1P43005 LINC01210-204ENST00000478772 1288 ntTSL 5 BASIC12.82□□□□□ -0.36
SLC1A1P43005 RNF7-205ENST00000480908 782 ntTSL 4 BASIC12.82□□□□□ -0.36
SLC1A1P43005 FAM153C-208ENST00000511189 926 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SLC1A1P43005 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SLC1A1P43005 AL118557.1-201ENST00000554408 440 ntBASIC12.82□□□□□ -0.36
SLC1A1P43005 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC12.82□□□□□ -0.36
SLC1A1P43005 ABHD17AP9-201ENST00000561925 548 ntBASIC12.82□□□□□ -0.36
SLC1A1P43005 AC015853.2-201ENST00000571282 493 ntTSL 4 BASIC12.82□□□□□ -0.36
SLC1A1P43005 RN7SL480P-201ENST00000581481 294 ntBASIC12.82□□□□□ -0.36
SLC1A1P43005 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC1A1P43005 KXD1-210ENST00000599000 498 ntTSL 2 BASIC12.82□□□□□ -0.36
SLC1A1P43005 AP003973.2-201ENST00000604700 499 ntBASIC12.82□□□□□ -0.36
SLC1A1P43005 AC009041.4-201ENST00000620075 638 ntBASIC12.82□□□□□ -0.36
SLC1A1P43005 LRRIQ4-201ENST00000340806 1827 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SLC1A1P43005 RGL1-201ENST00000304685 5100 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC1A1P43005 FUT6-203ENST00000524754 2598 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SLC1A1P43005 MRS2-203ENST00000378386 3313 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC1A1P43005 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC12.82□□□□□ -0.36
SLC1A1P43005 TFIP11-202ENST00000407148 2789 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SLC1A1P43005 ISM2-202ENST00000342219 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC1A1P43005 PCID2-206ENST00000375479 1671 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SLC1A1P43005 JPT2-201ENST00000248098 3718 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC1A1P43005 NNT-202ENST00000344920 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC1A1P43005 MEMO1-201ENST00000295065 4505 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC1A1P43005 PLA2G6-203ENST00000402064 3011 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SLC1A1P43005 LUC7L-203ENST00000397780 1335 ntTSL 5 BASIC12.82□□□□□ -0.36
SLC1A1P43005 EXD2-201ENST00000312994 5107 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SLC1A1P43005 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SLC1A1P43005 PCDH20-201ENST00000409204 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC1A1P43005 NCL-201ENST00000322723 4034 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SLC1A1P43005 STAT6-204ENST00000538913 2879 ntTSL 2 BASIC12.82□□□□□ -0.36
SLC1A1P43005 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SLC1A1P43005 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC1A1P43005 DOCK6-201ENST00000294618 6358 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC1A1P43005 PABPC1-219ENST00000522387 2331 ntTSL 2 BASIC12.82□□□□□ -0.36
SLC1A1P43005 AL645944.2-201ENST00000641702 1953 ntBASIC12.81□□□□□ -0.36
SLC1A1P43005 TCN2-205ENST00000450638 2159 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
SLC1A1P43005 INTS9-201ENST00000416984 2759 ntTSL 2 BASIC12.81□□□□□ -0.36
SLC1A1P43005 MCM7-201ENST00000303887 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 TIMM22-201ENST00000327158 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 SLC12A3-201ENST00000262502 4208 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SLC1A1P43005 NT5DC2-201ENST00000307076 2047 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
SLC1A1P43005 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 NBPF5P-201ENST00000357046 1606 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 TCF12-202ENST00000333725 4719 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC12.81□□□□□ -0.36
SLC1A1P43005 GLT8D2-201ENST00000360814 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 RMI2-202ENST00000572173 1865 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 PMF1-BGLAP-201ENST00000320139 773 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 JMJD7-PLA2G4B-201ENST00000342159 2966 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms