Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 FAM49B-215ENST00000519824 3798 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 TP53TG3B-201ENST00000341305 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 ACSL6-207ENST00000379264 6539 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 ANKRD34A-201ENST00000606888 3613 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 ETV5-201ENST00000306376 4111 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 DIAPH3-205ENST00000400324 4804 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 FMO3-201ENST00000367755 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NPIPA3F8WFD2 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
NPIPA3F8WFD2 DEDD-203ENST00000458050 2300 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
NPIPA3F8WFD2 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
NPIPA3F8WFD2 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
NPIPA3F8WFD2 ACSF3-218ENST00000614302 3751 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
NPIPA3F8WFD2 CCDC138-201ENST00000295124 2383 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.6
NPIPA3F8WFD2 TMEM136-201ENST00000314475 1434 ntTSL 2 BASIC11.27□□□□□ -0.6
NPIPA3F8WFD2 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
NPIPA3F8WFD2 COX6B2-205ENST00000588572 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
NPIPA3F8WFD2 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
NPIPA3F8WFD2 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
NPIPA3F8WFD2 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
NPIPA3F8WFD2 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
NPIPA3F8WFD2 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
NPIPA3F8WFD2 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
NPIPA3F8WFD2 MTRF1L-203ENST00000367233 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
NPIPA3F8WFD2 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
NPIPA3F8WFD2 AC008158.1-201ENST00000578759 3668 ntBASIC11.27□□□□□ -0.6
NPIPA3F8WFD2 TIPARP-202ENST00000461166 4181 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
NPIPA3F8WFD2 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
NPIPA3F8WFD2 ACTG1-216ENST00000615544 1723 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 ASPH-205ENST00000445642 3717 ntTSL 2 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 KCNJ3-203ENST00000544049 4523 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 CCRL2-202ENST00000399036 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 SERTAD3-202ENST00000392028 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 PDE2A-201ENST00000334456 4315 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 TBC1D3P3-201ENST00000342824 1080 ntBASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 NDUFB8-203ENST00000370322 713 ntTSL 2 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 DNAL4-202ENST00000406199 631 ntTSL 2 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 PGC-204ENST00000425343 1152 ntTSL 2 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 AL512422.2-201ENST00000426453 551 ntTSL 2 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 FTLP3-201ENST00000427242 528 ntBASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 U62317.1-201ENST00000434237 157 ntTSL 3 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 BX571846.1-201ENST00000447347 553 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 UCMA-202ENST00000463405 763 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 AC005996.2-201ENST00000465549 564 ntTSL 4 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 AC108082.1-201ENST00000510857 331 ntBASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 WISP1-204ENST00000517423 716 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 OR7E14P-201ENST00000526721 1000 ntBASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 MIR7-3HG-204ENST00000588758 865 ntTSL 3 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 KXD1-210ENST00000599000 498 ntTSL 2 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 AC091941.1-201ENST00000623003 576 ntBASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 FURIN-208ENST00000640725 224 ntTSL 5 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 SATB2-AS1-205ENST00000450728 3314 ntTSL 2 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 ZNF501-201ENST00000396048 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 TMLHE-201ENST00000334398 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 ALDH7A1-224ENST00000636743 2332 ntTSL 5 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 GPT2-202ENST00000440783 4228 ntTSL 2 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 TRIM39-204ENST00000396548 3198 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 TMTC4-201ENST00000328767 2101 ntTSL 2 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 C2orf69-201ENST00000319974 3728 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 AGGF1-201ENST00000312916 4509 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 PMEL-215ENST00000550464 1867 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 AP001198.1-201ENST00000586278 1852 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 POFUT2-213ENST00000612472 2959 ntTSL 5 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 TSPEAR-203ENST00000613245 3524 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 AC098650.1-201ENST00000635992 3535 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 AL596223.1-201ENST00000450995 1933 ntTSL 2 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 SERF1A-209ENST00000513436 1693 ntTSL 3 BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NPIPA3F8WFD2 CEP89-201ENST00000305768 5678 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 PAX6-201ENST00000241001 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 PCBP2-201ENST00000359282 1730 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 AC095350.1-201ENST00000443685 1711 ntTSL 5 BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 RBM20-201ENST00000369519 7233 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 KCNAB1-201ENST00000302490 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 TTC39B-202ENST00000380850 3221 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 FAM102A-203ENST00000373095 4144 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 BARD1-214ENST00000620057 1456 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 RINT1-201ENST00000257700 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 CELSR2-201ENST00000271332 10534 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 SNX12-207ENST00000622277 2422 ntAPPRIS P3 TSL 4 BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms