Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 CLASP2-201ENST00000313350 1597 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MTHFRP42898 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
MTHFRP42898 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MTHFRP42898 SP100-203ENST00000409112 2198 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MTHFRP42898 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MTHFRP42898 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
MTHFRP42898 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC12.9□□□□□ -0.34
MTHFRP42898 PRAMEF12-201ENST00000357726 1786 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
MTHFRP42898 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC12.9□□□□□ -0.34
MTHFRP42898 REG1B-201ENST00000305089 767 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MTHFRP42898 KRTAP4-8-201ENST00000318329 468 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
MTHFRP42898 SARNP-201ENST00000336133 926 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MTHFRP42898 KRT8P40-201ENST00000392131 563 ntBASIC12.9□□□□□ -0.34
MTHFRP42898 PPIL3-202ENST00000392283 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MTHFRP42898 PPIL3-204ENST00000409361 897 ntTSL 3 BASIC12.9□□□□□ -0.34
MTHFRP42898 AL357055.2-201ENST00000412567 434 ntBASIC12.9□□□□□ -0.34
MTHFRP42898 AKR1C5P-201ENST00000427165 609 ntBASIC12.9□□□□□ -0.34
MTHFRP42898 ZFX-AS1-201ENST00000427551 417 ntTSL 3 BASIC12.9□□□□□ -0.34
MTHFRP42898 CPSF4-206ENST00000441580 942 ntTSL 2 BASIC12.9□□□□□ -0.34
MTHFRP42898 IMMP2L-204ENST00000447215 1164 ntTSL 3 BASIC12.9□□□□□ -0.34
MTHFRP42898 FANCD2OS-204ENST00000450660 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MTHFRP42898 LINC01270-202ENST00000457853 943 ntTSL 3 BASIC12.9□□□□□ -0.34
MTHFRP42898 AL354676.1-201ENST00000458047 368 ntBASIC12.9□□□□□ -0.34
MTHFRP42898 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MTHFRP42898 AC026785.1-201ENST00000505520 580 ntBASIC12.9□□□□□ -0.34
MTHFRP42898 SCAMP1-AS1-202ENST00000513755 493 ntTSL 2 BASIC12.9□□□□□ -0.34
MTHFRP42898 AC245164.1-201ENST00000517731 412 ntTSL 3 BASIC12.9□□□□□ -0.34
MTHFRP42898 AC013489.2-201ENST00000558732 276 ntBASIC12.9□□□□□ -0.34
MTHFRP42898 AC009166.1-201ENST00000570060 487 ntTSL 2 BASIC12.9□□□□□ -0.34
MTHFRP42898 AC087222.1-201ENST00000571113 504 ntBASIC12.9□□□□□ -0.34
MTHFRP42898 LINC02074-201ENST00000581028 569 ntTSL 4 BASIC12.9□□□□□ -0.34
MTHFRP42898 LINC02074-202ENST00000584003 573 ntTSL 4 BASIC12.9□□□□□ -0.34
MTHFRP42898 KRT16P3-204ENST00000584759 681 ntTSL 5 BASIC12.9□□□□□ -0.34
MTHFRP42898 TRMT112P6-201ENST00000599234 372 ntBASIC12.9□□□□□ -0.34
MTHFRP42898 RAB5B-211ENST00000628569 496 ntTSL 5 BASIC12.9□□□□□ -0.34
MTHFRP42898 PRSS2-204ENST00000632805 807 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MTHFRP42898 UROD-221ENST00000636293 1102 ntTSL 5 BASIC12.9□□□□□ -0.34
MTHFRP42898 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MTHFRP42898 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MTHFRP42898 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
MTHFRP42898 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MTHFRP42898 UFSP2-201ENST00000264689 1630 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
MTHFRP42898 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
MTHFRP42898 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC12.9□□□□□ -0.34
MTHFRP42898 ARHGAP25-201ENST00000409030 2936 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MTHFRP42898 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MTHFRP42898 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC12.9□□□□□ -0.34
MTHFRP42898 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
MTHFRP42898 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
MTHFRP42898 AL512383.1-201ENST00000624175 2677 ntBASIC12.9□□□□□ -0.34
MTHFRP42898 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC12.9□□□□□ -0.34
MTHFRP42898 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MTHFRP42898 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
MTHFRP42898 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC12.9□□□□□ -0.34
MTHFRP42898 AL031666.1-201ENST00000413818 1809 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MTHFRP42898 FAM86C2P-205ENST00000531806 1814 ntTSL 2 BASIC12.9□□□□□ -0.34
MTHFRP42898 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MTHFRP42898 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MTHFRP42898 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
MTHFRP42898 IL1R2-201ENST00000332549 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
MTHFRP42898 HVCN1-209ENST00000620084 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
MTHFRP42898 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MTHFRP42898 PCYT1B-202ENST00000379144 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MTHFRP42898 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC12.89□□□□□ -0.35
MTHFRP42898 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
MTHFRP42898 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
MTHFRP42898 PDE9A-211ENST00000398232 1885 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MTHFRP42898 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
MTHFRP42898 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MTHFRP42898 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MTHFRP42898 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
MTHFRP42898 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC12.89□□□□□ -0.35
MTHFRP42898 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MTHFRP42898 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MTHFRP42898 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
MTHFRP42898 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
MTHFRP42898 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
MTHFRP42898 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
MTHFRP42898 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC12.89□□□□□ -0.35
MTHFRP42898 BMP4-205ENST00000558984 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MTHFRP42898 C3orf56-201ENST00000624688 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MTHFRP42898 NUDT7-201ENST00000268533 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MTHFRP42898 KLK8-201ENST00000291726 853 ntTSL 5 BASIC12.89□□□□□ -0.35
MTHFRP42898 AL449266.1-201ENST00000357393 557 ntAPPRIS P1 TSL 4 BASIC12.89□□□□□ -0.35
MTHFRP42898 B9D1-204ENST00000395616 733 ntTSL 3 BASIC12.89□□□□□ -0.35
MTHFRP42898 LINC00339-201ENST00000404210 1189 ntBASIC12.89□□□□□ -0.35
MTHFRP42898 EXOC7-206ENST00000406660 718 ntTSL 2 BASIC12.89□□□□□ -0.35
MTHFRP42898 BANF1P4-201ENST00000420029 270 ntBASIC12.89□□□□□ -0.35
MTHFRP42898 VN1R64P-201ENST00000424940 933 ntBASIC12.89□□□□□ -0.35
MTHFRP42898 KIF9-204ENST00000425853 740 ntTSL 2 BASIC12.89□□□□□ -0.35
MTHFRP42898 CIDECP-205ENST00000433871 770 ntBASIC12.89□□□□□ -0.35
MTHFRP42898 AL139011.1-201ENST00000442130 557 ntTSL 2 BASIC12.89□□□□□ -0.35
MTHFRP42898 AC074366.1-204ENST00000446277 552 ntTSL 3 BASIC12.89□□□□□ -0.35
MTHFRP42898 AC004217.1-201ENST00000469026 794 ntBASIC12.89□□□□□ -0.35
MTHFRP42898 RPL34-207ENST00000506397 549 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
MTHFRP42898 AC079804.3-201ENST00000508367 1000 ntBASIC12.89□□□□□ -0.35
MTHFRP42898 AC114321.1-201ENST00000520075 533 ntTSL 3 BASIC12.89□□□□□ -0.35
MTHFRP42898 AC022784.6-203ENST00000520255 863 ntTSL 3 BASIC12.89□□□□□ -0.35
MTHFRP42898 RHOJ-202ENST00000555125 548 ntTSL 2 BASIC12.89□□□□□ -0.35
MTHFRP42898 NUDT7-205ENST00000564085 899 ntTSL 2 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms