Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 PLPP4-201ENST00000369073 1135 ntTSL 5 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 RPS21-202ENST00000370562 1002 ntTSL 2 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 DMKN-202ENST00000392206 458 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 APRT-202ENST00000426324 664 ntTSL 2 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 HTR3D-203ENST00000428798 1215 ntTSL 5 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 AC010240.1-201ENST00000429606 459 ntBASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 HTR3D-204ENST00000453435 1043 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 AC023157.1-201ENST00000453713 402 ntBASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 AP003469.2-201ENST00000524369 430 ntTSL 3 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 HNRNPA1P72-201ENST00000529511 967 ntBASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 AL121790.2-201ENST00000553425 379 ntTSL 4 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 MT1G-204ENST00000569500 305 ntTSL 3 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 AC092069.1-201ENST00000589120 270 ntTSL 3 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 AC022146.2-201ENST00000605980 348 ntTSL 3 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 FAM92B-203ENST00000629253 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 TNFAIP3-209ENST00000619035 2267 ntTSL 5 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 CABYR-203ENST00000399496 1414 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 SIRPG-202ENST00000303415 1716 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 CT55-202ENST00000344129 1728 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 SIRPG-204ENST00000381580 1732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 TRNT1-202ENST00000280591 2180 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 ARHGAP12-205ENST00000396144 5084 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 NRAP-203ENST00000369358 5534 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 SLCO2A1-201ENST00000310926 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 TMPO-212ENST00000556029 4242 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 ANKMY1-201ENST00000272972 3228 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 AC004585.2-201ENST00000624090 1473 ntBASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 AC078850.1-201ENST00000514265 1623 ntTSL 2 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 GRM4-205ENST00000538487 4153 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 WDR83OS-202ENST00000596731 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 SULT1A4-201ENST00000360423 1390 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 IFNAR2-201ENST00000342101 2606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 EDAR-203ENST00000409271 4323 ntTSL 2 BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 TRAP1-212ENST00000575671 2309 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 CUL7-201ENST00000265348 5254 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 HSD17B3-201ENST00000375262 984 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 TXNRD3NB-201ENST00000404489 738 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 MTND6P7-201ENST00000433237 524 ntBASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 AC004910.1-201ENST00000433493 787 ntBASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 HNRNPA1P30-202ENST00000440699 997 ntBASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 KRT18P26-201ENST00000454475 1281 ntBASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 AC007405.2-203ENST00000455988 547 ntTSL 4 BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 RN7SL483P-201ENST00000478417 285 ntBASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 TMA16-204ENST00000508268 608 ntTSL 2 BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 AC016924.1-201ENST00000511512 501 ntTSL 3 BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 LINC01194-203ENST00000513051 670 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 RN7SL750P-201ENST00000582814 238 ntBASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 AC020897.1-201ENST00000587702 561 ntTSL 4 BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 AC239600.1-201ENST00000603201 462 ntBASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 LINC01206-212ENST00000609168 988 ntTSL 5 BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 AC015912.3-201ENST00000619432 348 ntBASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 PRSS2-205ENST00000632998 817 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 RDH16-202ENST00000398138 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 VIPAS39-206ENST00000553888 2934 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 PMS1-204ENST00000409823 2795 ntTSL 5 BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 AP000350.6-201ENST00000609510 5637 ntBASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 POM121L1P-202ENST00000605258 1835 ntBASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 PLAU-201ENST00000372764 2321 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 ALG8-201ENST00000299626 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 GNL3-201ENST00000394799 2041 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 LMCD1-202ENST00000397386 1501 ntTSL 2 BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 TPRX1-203ENST00000543508 1526 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 ARL4A-203ENST00000396663 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NPIPA3F8WFD2 BOC-215ENST00000495514 4646 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 SCN5A-207ENST00000449557 5898 ntTSL 5 BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 CREB5-205ENST00000409603 1944 ntTSL 2 BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 TMUB2-203ENST00000446571 1580 ntTSL 2 BASIC11.29□□□□□ -0.6
NPIPA3F8WFD2 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms