Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DNMT3AQ9Y6K1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DNMT3AQ9Y6K1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
DNMT3AQ9Y6K1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
DNMT3AQ9Y6K1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.26■□□□□ 0.99
DNMT3AQ9Y6K1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
DNMT3AQ9Y6K1 MIR935-201ENST00000401179 91 ntBASIC21.26■□□□□ 0.99
DNMT3AQ9Y6K1 YBX1P1-201ENST00000445822 960 ntBASIC21.26■□□□□ 0.99
DNMT3AQ9Y6K1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DNMT3AQ9Y6K1 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.26■□□□□ 0.99
DNMT3AQ9Y6K1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DNMT3AQ9Y6K1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DNMT3AQ9Y6K1 LINC00526-201ENST00000581067 1875 ntBASIC21.26■□□□□ 0.99
DNMT3AQ9Y6K1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DNMT3AQ9Y6K1 C1orf229-201ENST00000623686 2258 ntBASIC21.25■□□□□ 0.99
DNMT3AQ9Y6K1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
DNMT3AQ9Y6K1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DNMT3AQ9Y6K1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DNMT3AQ9Y6K1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.25■□□□□ 0.99
DNMT3AQ9Y6K1 RARRES2P6-201ENST00000567333 442 ntBASIC21.25■□□□□ 0.99
DNMT3AQ9Y6K1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
DNMT3AQ9Y6K1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DNMT3AQ9Y6K1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.24■□□□□ 0.99
DNMT3AQ9Y6K1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.24■□□□□ 0.99
DNMT3AQ9Y6K1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DNMT3AQ9Y6K1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.24■□□□□ 0.99
DNMT3AQ9Y6K1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DNMT3AQ9Y6K1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DNMT3AQ9Y6K1 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.24■□□□□ 0.99
DNMT3AQ9Y6K1 AC026271.2-201ENST00000428091 497 ntBASIC21.24■□□□□ 0.99
DNMT3AQ9Y6K1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.24■□□□□ 0.99
DNMT3AQ9Y6K1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.24■□□□□ 0.99
DNMT3AQ9Y6K1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.24■□□□□ 0.99
DNMT3AQ9Y6K1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.24■□□□□ 0.99
DNMT3AQ9Y6K1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.24■□□□□ 0.99
DNMT3AQ9Y6K1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
DNMT3AQ9Y6K1 MIR6084-201ENST00000622012 110 ntBASIC21.24■□□□□ 0.99
DNMT3AQ9Y6K1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.24■□□□□ 0.99
DNMT3AQ9Y6K1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DNMT3AQ9Y6K1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
DNMT3AQ9Y6K1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DNMT3AQ9Y6K1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.24■□□□□ 0.99
DNMT3AQ9Y6K1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
DNMT3AQ9Y6K1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DNMT3AQ9Y6K1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.23■□□□□ 0.99
DNMT3AQ9Y6K1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DNMT3AQ9Y6K1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DNMT3AQ9Y6K1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
DNMT3AQ9Y6K1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DNMT3AQ9Y6K1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
DNMT3AQ9Y6K1 AL034346.1-201ENST00000568244 1277 ntBASIC21.23■□□□□ 0.99
DNMT3AQ9Y6K1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
DNMT3AQ9Y6K1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.23■□□□□ 0.99
DNMT3AQ9Y6K1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.23■□□□□ 0.99
DNMT3AQ9Y6K1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
DNMT3AQ9Y6K1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DNMT3AQ9Y6K1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DNMT3AQ9Y6K1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
DNMT3AQ9Y6K1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DNMT3AQ9Y6K1 C9orf163-202ENST00000624034 2573 ntBASIC21.23■□□□□ 0.99
DNMT3AQ9Y6K1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DNMT3AQ9Y6K1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DNMT3AQ9Y6K1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.22■□□□□ 0.99
DNMT3AQ9Y6K1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DNMT3AQ9Y6K1 AC009237.3-201ENST00000393279 1427 ntBASIC21.22■□□□□ 0.99
DNMT3AQ9Y6K1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DNMT3AQ9Y6K1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.22■□□□□ 0.99
DNMT3AQ9Y6K1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DNMT3AQ9Y6K1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DNMT3AQ9Y6K1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
DNMT3AQ9Y6K1 AC139530.1-201ENST00000575312 1977 ntBASIC21.22■□□□□ 0.99
DNMT3AQ9Y6K1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DNMT3AQ9Y6K1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
DNMT3AQ9Y6K1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
DNMT3AQ9Y6K1 LINC02228-203ENST00000641970 1355 ntBASIC21.22■□□□□ 0.99
DNMT3AQ9Y6K1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT3AQ9Y6K1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.21■□□□□ 0.99
DNMT3AQ9Y6K1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT3AQ9Y6K1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT3AQ9Y6K1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT3AQ9Y6K1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
DNMT3AQ9Y6K1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.21■□□□□ 0.99
DNMT3AQ9Y6K1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT3AQ9Y6K1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT3AQ9Y6K1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT3AQ9Y6K1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT3AQ9Y6K1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
DNMT3AQ9Y6K1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DNMT3AQ9Y6K1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.2■□□□□ 0.98
DNMT3AQ9Y6K1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DNMT3AQ9Y6K1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DNMT3AQ9Y6K1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.2■□□□□ 0.98
DNMT3AQ9Y6K1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.2■□□□□ 0.98
DNMT3AQ9Y6K1 TPRG1LP1-201ENST00000598702 760 ntBASIC21.2■□□□□ 0.98
DNMT3AQ9Y6K1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.2■□□□□ 0.98
DNMT3AQ9Y6K1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.2■□□□□ 0.98
DNMT3AQ9Y6K1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.2■□□□□ 0.98
DNMT3AQ9Y6K1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DNMT3AQ9Y6K1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
DNMT3AQ9Y6K1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms