Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.06■■□□□ 1.44
SCN10AQ9Y5Y9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
SCN10AQ9Y5Y9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.06■■□□□ 1.44
SCN10AQ9Y5Y9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.06■■□□□ 1.44
SCN10AQ9Y5Y9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SCN10AQ9Y5Y9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
SCN10AQ9Y5Y9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SCN10AQ9Y5Y9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.05■■□□□ 1.44
SCN10AQ9Y5Y9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC24.05■■□□□ 1.44
SCN10AQ9Y5Y9 APTR-205ENST00000447009 902 ntTSL 2 BASIC24.05■■□□□ 1.44
SCN10AQ9Y5Y9 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.05■■□□□ 1.44
SCN10AQ9Y5Y9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.05■■□□□ 1.44
SCN10AQ9Y5Y9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC24.05■■□□□ 1.44
SCN10AQ9Y5Y9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC24.05■■□□□ 1.44
SCN10AQ9Y5Y9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SCN10AQ9Y5Y9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.05■■□□□ 1.44
SCN10AQ9Y5Y9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SCN10AQ9Y5Y9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SCN10AQ9Y5Y9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SCN10AQ9Y5Y9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SCN10AQ9Y5Y9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SCN10AQ9Y5Y9 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SCN10AQ9Y5Y9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SCN10AQ9Y5Y9 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.04■■□□□ 1.44
SCN10AQ9Y5Y9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC24.04■■□□□ 1.44
SCN10AQ9Y5Y9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC24.04■■□□□ 1.44
SCN10AQ9Y5Y9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC24.04■■□□□ 1.44
SCN10AQ9Y5Y9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SCN10AQ9Y5Y9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
SCN10AQ9Y5Y9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
SCN10AQ9Y5Y9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC24.04■■□□□ 1.44
SCN10AQ9Y5Y9 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC24.03■■□□□ 1.44
SCN10AQ9Y5Y9 DUSP8P5-201ENST00000422884 1815 ntBASIC24.03■■□□□ 1.44
SCN10AQ9Y5Y9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SCN10AQ9Y5Y9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.03■■□□□ 1.44
SCN10AQ9Y5Y9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC24.03■■□□□ 1.44
SCN10AQ9Y5Y9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.03■■□□□ 1.44
SCN10AQ9Y5Y9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SCN10AQ9Y5Y9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
SCN10AQ9Y5Y9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.03■■□□□ 1.44
SCN10AQ9Y5Y9 UQCRFS1P1-201ENST00000435169 820 ntBASIC24.03■■□□□ 1.44
SCN10AQ9Y5Y9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.03■■□□□ 1.44
SCN10AQ9Y5Y9 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC24.03■■□□□ 1.44
SCN10AQ9Y5Y9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.03■■□□□ 1.44
SCN10AQ9Y5Y9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC24.03■■□□□ 1.44
SCN10AQ9Y5Y9 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SCN10AQ9Y5Y9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC24.03■■□□□ 1.44
SCN10AQ9Y5Y9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SCN10AQ9Y5Y9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
SCN10AQ9Y5Y9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.03■■□□□ 1.44
SCN10AQ9Y5Y9 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.02■■□□□ 1.44
SCN10AQ9Y5Y9 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.02■■□□□ 1.44
SCN10AQ9Y5Y9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SCN10AQ9Y5Y9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24.02■■□□□ 1.44
SCN10AQ9Y5Y9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SCN10AQ9Y5Y9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SCN10AQ9Y5Y9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SCN10AQ9Y5Y9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SCN10AQ9Y5Y9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
SCN10AQ9Y5Y9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC24.02■■□□□ 1.43
SCN10AQ9Y5Y9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.01■■□□□ 1.43
SCN10AQ9Y5Y9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SCN10AQ9Y5Y9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SCN10AQ9Y5Y9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SCN10AQ9Y5Y9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC24.01■■□□□ 1.43
SCN10AQ9Y5Y9 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.01■■□□□ 1.43
SCN10AQ9Y5Y9 AL121832.2-201ENST00000610979 668 ntBASIC24.01■■□□□ 1.43
SCN10AQ9Y5Y9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC24.01■■□□□ 1.43
SCN10AQ9Y5Y9 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
SCN10AQ9Y5Y9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SCN10AQ9Y5Y9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
SCN10AQ9Y5Y9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC24■■□□□ 1.43
SCN10AQ9Y5Y9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SCN10AQ9Y5Y9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24■■□□□ 1.43
SCN10AQ9Y5Y9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
SCN10AQ9Y5Y9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC24■■□□□ 1.43
SCN10AQ9Y5Y9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC24■■□□□ 1.43
SCN10AQ9Y5Y9 ANOS2P-203ENST00000472227 1816 ntBASIC24■■□□□ 1.43
SCN10AQ9Y5Y9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SCN10AQ9Y5Y9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24■■□□□ 1.43
SCN10AQ9Y5Y9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC24■■□□□ 1.43
SCN10AQ9Y5Y9 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
SCN10AQ9Y5Y9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24■■□□□ 1.43
SCN10AQ9Y5Y9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24■■□□□ 1.43
SCN10AQ9Y5Y9 AC138907.5-202ENST00000569484 235 ntBASIC24■■□□□ 1.43
SCN10AQ9Y5Y9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC24■■□□□ 1.43
SCN10AQ9Y5Y9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24■■□□□ 1.43
SCN10AQ9Y5Y9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SCN10AQ9Y5Y9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.99■■□□□ 1.43
SCN10AQ9Y5Y9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
SCN10AQ9Y5Y9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SCN10AQ9Y5Y9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SCN10AQ9Y5Y9 AC010141.2-201ENST00000452426 721 ntBASIC23.99■■□□□ 1.43
SCN10AQ9Y5Y9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.99■■□□□ 1.43
SCN10AQ9Y5Y9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.98■■□□□ 1.43
SCN10AQ9Y5Y9 TSPY6P-201ENST00000448518 926 ntBASIC23.98■■□□□ 1.43
SCN10AQ9Y5Y9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.98■■□□□ 1.43
SCN10AQ9Y5Y9 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCN10AQ9Y5Y9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SCN10AQ9Y5Y9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms