Protein–RNA interactions for Protein: Q9Y4D8

HECTD4, Probable E3 ubiquitin-protein ligase HECTD4, humanhuman

Predictions only

Length 3,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4Q9Y4D8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HECTD4Q9Y4D8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
HECTD4Q9Y4D8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HECTD4Q9Y4D8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.44□□□□□ -0.1
HECTD4Q9Y4D8 AC133041.1-202ENST00000642053 222 ntBASIC14.44□□□□□ -0.1
HECTD4Q9Y4D8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HECTD4Q9Y4D8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HECTD4Q9Y4D8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC14.44□□□□□ -0.1
HECTD4Q9Y4D8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HECTD4Q9Y4D8 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.43□□□□□ -0.1
HECTD4Q9Y4D8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HECTD4Q9Y4D8 MYC-209ENST00000641252 345 ntBASIC14.43□□□□□ -0.1
HECTD4Q9Y4D8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HECTD4Q9Y4D8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC14.43□□□□□ -0.1
HECTD4Q9Y4D8 PPP1R14BP2-201ENST00000426284 444 ntBASIC14.43□□□□□ -0.1
HECTD4Q9Y4D8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
HECTD4Q9Y4D8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC14.43□□□□□ -0.1
HECTD4Q9Y4D8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HECTD4Q9Y4D8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HECTD4Q9Y4D8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HECTD4Q9Y4D8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.43□□□□□ -0.1
HECTD4Q9Y4D8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC14.43□□□□□ -0.1
HECTD4Q9Y4D8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC14.43□□□□□ -0.1
HECTD4Q9Y4D8 H19-210ENST00000439725 1929 ntTSL 2 BASIC14.43□□□□□ -0.1
HECTD4Q9Y4D8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HECTD4Q9Y4D8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HECTD4Q9Y4D8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HECTD4Q9Y4D8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HECTD4Q9Y4D8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.42□□□□□ -0.1
HECTD4Q9Y4D8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HECTD4Q9Y4D8 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC14.42□□□□□ -0.1
HECTD4Q9Y4D8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC14.42□□□□□ -0.1
HECTD4Q9Y4D8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HECTD4Q9Y4D8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HECTD4Q9Y4D8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HECTD4Q9Y4D8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
HECTD4Q9Y4D8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HECTD4Q9Y4D8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HECTD4Q9Y4D8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC14.42□□□□□ -0.1
HECTD4Q9Y4D8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.41□□□□□ -0.1
HECTD4Q9Y4D8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC14.41□□□□□ -0.1
HECTD4Q9Y4D8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HECTD4Q9Y4D8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HECTD4Q9Y4D8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HECTD4Q9Y4D8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HECTD4Q9Y4D8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HECTD4Q9Y4D8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HECTD4Q9Y4D8 AP003733.4-201ENST00000623785 1697 ntBASIC14.41□□□□□ -0.1
HECTD4Q9Y4D8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HECTD4Q9Y4D8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HECTD4Q9Y4D8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HECTD4Q9Y4D8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HECTD4Q9Y4D8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC14.41□□□□□ -0.1
HECTD4Q9Y4D8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HECTD4Q9Y4D8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HECTD4Q9Y4D8 LINC00543-201ENST00000567234 1845 ntBASIC14.41□□□□□ -0.1
HECTD4Q9Y4D8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.41□□□□□ -0.1
HECTD4Q9Y4D8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HECTD4Q9Y4D8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HECTD4Q9Y4D8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
HECTD4Q9Y4D8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.41□□□□□ -0.1
HECTD4Q9Y4D8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HECTD4Q9Y4D8 TESC-206ENST00000541210 936 ntTSL 3 BASIC14.41□□□□□ -0.1
HECTD4Q9Y4D8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HECTD4Q9Y4D8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HECTD4Q9Y4D8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HECTD4Q9Y4D8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HECTD4Q9Y4D8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HECTD4Q9Y4D8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.4□□□□□ -0.1
HECTD4Q9Y4D8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HECTD4Q9Y4D8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC14.4□□□□□ -0.1
HECTD4Q9Y4D8 MIR4497-201ENST00000583208 89 ntBASIC14.4□□□□□ -0.1
HECTD4Q9Y4D8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HECTD4Q9Y4D8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HECTD4Q9Y4D8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HECTD4Q9Y4D8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.4□□□□□ -0.1
HECTD4Q9Y4D8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.4□□□□□ -0.1
HECTD4Q9Y4D8 AC073648.6-201ENST00000641589 218 ntBASIC14.4□□□□□ -0.1
HECTD4Q9Y4D8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HECTD4Q9Y4D8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HECTD4Q9Y4D8 AC133552.2-202ENST00000575694 574 ntBASIC14.39□□□□□ -0.11
HECTD4Q9Y4D8 LINC01124-201ENST00000409786 2117 ntBASIC14.39□□□□□ -0.11
HECTD4Q9Y4D8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC14.39□□□□□ -0.11
HECTD4Q9Y4D8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HECTD4Q9Y4D8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HECTD4Q9Y4D8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HECTD4Q9Y4D8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HECTD4Q9Y4D8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HECTD4Q9Y4D8 AC007322.4-201ENST00000509611 723 ntBASIC14.39□□□□□ -0.11
HECTD4Q9Y4D8 RNA5SP413-201ENST00000516373 109 ntBASIC14.39□□□□□ -0.11
HECTD4Q9Y4D8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HECTD4Q9Y4D8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HECTD4Q9Y4D8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HECTD4Q9Y4D8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HECTD4Q9Y4D8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HECTD4Q9Y4D8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.39□□□□□ -0.11
HECTD4Q9Y4D8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC14.39□□□□□ -0.11
HECTD4Q9Y4D8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HECTD4Q9Y4D8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HECTD4Q9Y4D8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms