Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM2Q9Y333 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM2Q9Y333 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LSM2Q9Y333 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM2Q9Y333 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
LSM2Q9Y333 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM2Q9Y333 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
LSM2Q9Y333 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM2Q9Y333 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.27■□□□□ 0.68
LSM2Q9Y333 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM2Q9Y333 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.27■□□□□ 0.68
LSM2Q9Y333 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.27■□□□□ 0.68
LSM2Q9Y333 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM2Q9Y333 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.27■□□□□ 0.68
LSM2Q9Y333 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM2Q9Y333 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LSM2Q9Y333 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM2Q9Y333 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LSM2Q9Y333 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM2Q9Y333 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.27■□□□□ 0.68
LSM2Q9Y333 LINC01006-201ENST00000333319 2292 ntBASIC19.27■□□□□ 0.68
LSM2Q9Y333 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LSM2Q9Y333 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.27■□□□□ 0.67
LSM2Q9Y333 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
LSM2Q9Y333 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LSM2Q9Y333 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LSM2Q9Y333 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
LSM2Q9Y333 AC004687.1-201ENST00000579003 1625 ntBASIC19.26■□□□□ 0.67
LSM2Q9Y333 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
LSM2Q9Y333 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSM2Q9Y333 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSM2Q9Y333 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSM2Q9Y333 KRT18P60-201ENST00000312876 1297 ntBASIC19.26■□□□□ 0.67
LSM2Q9Y333 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LSM2Q9Y333 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.26■□□□□ 0.67
LSM2Q9Y333 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.26■□□□□ 0.67
LSM2Q9Y333 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.26■□□□□ 0.67
LSM2Q9Y333 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LSM2Q9Y333 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LSM2Q9Y333 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSM2Q9Y333 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSM2Q9Y333 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LSM2Q9Y333 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LSM2Q9Y333 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.25■□□□□ 0.67
LSM2Q9Y333 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.25■□□□□ 0.67
LSM2Q9Y333 AC139795.1-202ENST00000500444 432 ntBASIC19.25■□□□□ 0.67
LSM2Q9Y333 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSM2Q9Y333 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSM2Q9Y333 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSM2Q9Y333 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSM2Q9Y333 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSM2Q9Y333 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
LSM2Q9Y333 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LSM2Q9Y333 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LSM2Q9Y333 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LSM2Q9Y333 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LSM2Q9Y333 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LSM2Q9Y333 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LSM2Q9Y333 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.24■□□□□ 0.67
LSM2Q9Y333 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.24■□□□□ 0.67
LSM2Q9Y333 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LSM2Q9Y333 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.24■□□□□ 0.67
LSM2Q9Y333 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.24■□□□□ 0.67
LSM2Q9Y333 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LSM2Q9Y333 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LSM2Q9Y333 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
LSM2Q9Y333 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LSM2Q9Y333 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LSM2Q9Y333 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.23■□□□□ 0.67
LSM2Q9Y333 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LSM2Q9Y333 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.23■□□□□ 0.67
LSM2Q9Y333 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LSM2Q9Y333 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LSM2Q9Y333 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.23■□□□□ 0.67
LSM2Q9Y333 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LSM2Q9Y333 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.23■□□□□ 0.67
LSM2Q9Y333 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LSM2Q9Y333 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.23■□□□□ 0.67
LSM2Q9Y333 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LSM2Q9Y333 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.23■□□□□ 0.67
LSM2Q9Y333 AC026471.6-201ENST00000622954 1905 ntBASIC19.23■□□□□ 0.67
LSM2Q9Y333 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.23■□□□□ 0.67
LSM2Q9Y333 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.23■□□□□ 0.67
LSM2Q9Y333 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LSM2Q9Y333 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LSM2Q9Y333 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
LSM2Q9Y333 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LSM2Q9Y333 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.22■□□□□ 0.67
LSM2Q9Y333 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LSM2Q9Y333 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LSM2Q9Y333 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LSM2Q9Y333 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LSM2Q9Y333 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.22■□□□□ 0.67
LSM2Q9Y333 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LSM2Q9Y333 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.22■□□□□ 0.67
LSM2Q9Y333 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LSM2Q9Y333 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LSM2Q9Y333 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.22■□□□□ 0.67
LSM2Q9Y333 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LSM2Q9Y333 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms