Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
RCL1Q9Y2P8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RCL1Q9Y2P8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RCL1Q9Y2P8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RCL1Q9Y2P8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.67■□□□□ 0.42
RCL1Q9Y2P8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.67■□□□□ 0.42
RCL1Q9Y2P8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.67■□□□□ 0.42
RCL1Q9Y2P8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RCL1Q9Y2P8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RCL1Q9Y2P8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
RCL1Q9Y2P8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RCL1Q9Y2P8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RCL1Q9Y2P8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RCL1Q9Y2P8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RCL1Q9Y2P8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RCL1Q9Y2P8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.66■□□□□ 0.42
RCL1Q9Y2P8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RCL1Q9Y2P8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RCL1Q9Y2P8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RCL1Q9Y2P8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.66■□□□□ 0.42
RCL1Q9Y2P8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RCL1Q9Y2P8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.66■□□□□ 0.42
RCL1Q9Y2P8 AC120024.1-201ENST00000562672 995 ntBASIC17.66■□□□□ 0.42
RCL1Q9Y2P8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RCL1Q9Y2P8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RCL1Q9Y2P8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RCL1Q9Y2P8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.66■□□□□ 0.42
RCL1Q9Y2P8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.66■□□□□ 0.42
RCL1Q9Y2P8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RCL1Q9Y2P8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RCL1Q9Y2P8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RCL1Q9Y2P8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RCL1Q9Y2P8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RCL1Q9Y2P8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RCL1Q9Y2P8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
RCL1Q9Y2P8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RCL1Q9Y2P8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RCL1Q9Y2P8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.65■□□□□ 0.42
RCL1Q9Y2P8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
RCL1Q9Y2P8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RCL1Q9Y2P8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RCL1Q9Y2P8 LINC01521-201ENST00000504184 1943 ntBASIC17.65■□□□□ 0.42
RCL1Q9Y2P8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RCL1Q9Y2P8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RCL1Q9Y2P8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RCL1Q9Y2P8 FEM1AP4-201ENST00000443167 1987 ntBASIC17.65■□□□□ 0.42
RCL1Q9Y2P8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RCL1Q9Y2P8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.65■□□□□ 0.42
RCL1Q9Y2P8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.65■□□□□ 0.42
RCL1Q9Y2P8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RCL1Q9Y2P8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RCL1Q9Y2P8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RCL1Q9Y2P8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RCL1Q9Y2P8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RCL1Q9Y2P8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.64■□□□□ 0.41
RCL1Q9Y2P8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RCL1Q9Y2P8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RCL1Q9Y2P8 AC019171.1-201ENST00000601251 1056 ntBASIC17.64■□□□□ 0.41
RCL1Q9Y2P8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RCL1Q9Y2P8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RCL1Q9Y2P8 RNF126P1-201ENST00000567452 1320 ntBASIC17.64■□□□□ 0.41
RCL1Q9Y2P8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RCL1Q9Y2P8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RCL1Q9Y2P8 LINC01529-204ENST00000636474 1715 ntBASIC17.64■□□□□ 0.41
RCL1Q9Y2P8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RCL1Q9Y2P8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RCL1Q9Y2P8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RCL1Q9Y2P8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RCL1Q9Y2P8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.63■□□□□ 0.41
RCL1Q9Y2P8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RCL1Q9Y2P8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RCL1Q9Y2P8 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RCL1Q9Y2P8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RCL1Q9Y2P8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.63■□□□□ 0.41
RCL1Q9Y2P8 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RCL1Q9Y2P8 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RCL1Q9Y2P8 MIR4281-201ENST00000580852 62 ntBASIC17.63■□□□□ 0.41
RCL1Q9Y2P8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.63■□□□□ 0.41
RCL1Q9Y2P8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.63■□□□□ 0.41
RCL1Q9Y2P8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
RCL1Q9Y2P8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RCL1Q9Y2P8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RCL1Q9Y2P8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RCL1Q9Y2P8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.63■□□□□ 0.41
RCL1Q9Y2P8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RCL1Q9Y2P8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
RCL1Q9Y2P8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.62■□□□□ 0.41
RCL1Q9Y2P8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
RCL1Q9Y2P8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RCL1Q9Y2P8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RCL1Q9Y2P8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RCL1Q9Y2P8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.62■□□□□ 0.41
RCL1Q9Y2P8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RCL1Q9Y2P8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RCL1Q9Y2P8 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RCL1Q9Y2P8 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RCL1Q9Y2P8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RCL1Q9Y2P8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RCL1Q9Y2P8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RCL1Q9Y2P8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms